RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 HSF4Q9ULV5 492 aa8.59□□□□□ -1.03
CDK9-205ENST00000498339 MRPS7Q9Y2R9 242 aaKnown RBP8.59□□□□□ -1.03
CDK9-205ENST00000498339 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 MFSD2BA6NFX1 497 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 MPTX1A8MV57 137 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 J3QRK9 145 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 KBTBD11O94819 623 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 AREGP15514 252 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 RPA2P15927 270 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 HIST1H1BP16401 226 aaKnown RBP8.58□□□□□ -1.04
CDK9-205ENST00000498339 GALP22466 123 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 CRHBPP24387 322 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 PSMD7P51665 324 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 MFAP2P55001 183 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 ACSM3Q53FZ2 586 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 KCTD9Q7L273 389 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 APRG1Q8IVJ8 170 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 SETD9Q8NE22 299 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 OR4A5Q8NH83 315 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 VSTM2AQ8TAG5 236 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 MAFIPQ8WZ33 124 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 CABLES2Q9BTV7 478 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 CSTL1Q9H114 145 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 OR51E2Q9H255 320 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 PRELID3BQ9Y3B1 194 aa8.58□□□□□ -1.04
CDK9-205ENST00000498339 TRBV6-7A0A0A0MS04 114 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 C11orf94C9JXX5 98 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 RAB27BO00194 218 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 PSMB6P28072 239 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 ELLP55199 621 aaPredicted RBP8.57□□□□□ -1.04
CDK9-205ENST00000498339 WNT4P56705 351 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 QRFPP83859 136 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 ST3GAL4Q11206 333 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 HSD17B12Q53GQ0 312 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 ZFP1Q6P2D0 407 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 ZNF485Q8NCK3 441 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 PHYHIPQ92561 330 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 C20orf24Q9BUV8 137 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 SLC2A9Q9NRM0 540 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 APLNQ9ULZ1 77 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 DNAH11Q96DT5 4516 aa8.57□□□□□ -1.04
CDK9-205ENST00000498339 EFCAB10A6NFE3 127 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
CDK9-205ENST00000498339 FCGR3AP08637 254 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
CDK9-205ENST00000498339 CD36P16671 472 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 TFPI2P48307 235 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 ARFRP1Q13795 201 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 ZNF124Q15973 351 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 OR56B1Q8NGI3 324 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 OR4S2Q8NH73 311 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 TMEM190Q8WZ59 177 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 OR2A7Q96R45 310 aa8.56□□□□□ -1.04
CDK9-205ENST00000498339 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
CDK9-205ENST00000498339 IGLV11-55A0A075B6I3 123 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 A0A075B6Q4 140 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 IGHV3OR16-8A0A075B7F1 116 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 FOXI3A8MTJ6 420 aaPredicted RBP8.55□□□□□ -1.04
CDK9-205ENST00000498339 E7EUB6 86 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 M0R2N4 97 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 ZNF207O43670 478 aaKnown RBP8.55□□□□□ -1.04
CDK9-205ENST00000498339 CD1AP06126 327 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 CRYGCP07315 174 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 CTSDP07339 412 aaPredicted RBP8.55□□□□□ -1.04
CDK9-205ENST00000498339 ZNF735P0CB33 412 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 MAS1LP35410 378 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 TMEM50BP56557 158 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 RAB11BQ15907 218 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 PLAC9Q5JTB6 97 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 SSX9Q7RTT3 188 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 NR2C2APQ86WQ0 139 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 FAM89BQ8N5H3 189 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 ZNF645Q8N7E2 425 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 TCTEX1D2Q8WW35 142 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 CYGBQ8WWM9 190 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 SMPD3Q9NY59 655 aaPredicted RBP8.55□□□□□ -1.04
CDK9-205ENST00000498339 PKD1P98161 4303 aa8.55□□□□□ -1.04
CDK9-205ENST00000498339 IGKV3-7A0A075B6H7 116 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 IGHV4-4A0A075B6R2 117 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 A0A1B0GW64 132 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 OR2T8A6NH00 312 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 TGOLN2O43493 480 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 ATP5HO75947 161 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 CLDN12P56749 244 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 TMEM187Q14656 261 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 AHSA2Q719I0 299 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 MS4A15Q8N5U1 240 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 TMEM167AQ8TBQ9 72 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 ZNF502Q8TBZ5 544 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 ZNF436Q9C0F3 470 aaPredicted RBP8.54□□□□□ -1.04
CDK9-205ENST00000498339 THYN1Q9P016 225 aa8.54□□□□□ -1.04
CDK9-205ENST00000498339 SLC17A2O00624 439 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 DENRO43583 198 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms