RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 HIST1H2BLQ99880 126 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 SPCS1Q9Y6A9 102 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 ICAM4Q14773 271 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 RBPMS2Q6ZRY4 209 aaKnown RBP12.85□□□□□ -0.35
C4A-259ENST00000498271 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 BRWD1Q9NSI6 2320 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 A0A1B0GW15 77 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 OR2H2O95918 312 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 UCP1P25874 307 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 OTX1P32242 354 aaPredicted RBP12.85□□□□□ -0.35
C4A-259ENST00000498271 TMEM30BQ3MIR4 351 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 ZNF324BQ6AW86 544 aaPredicted RBP12.85□□□□□ -0.35
C4A-259ENST00000498271 OR5A1Q8NGJ0 315 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 IMMP2LQ96T52 175 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 CHRNA10Q9GZZ6 450 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 TDRD6O60522 2096 aaKnown RBP12.85□□□□□ -0.35
C4A-259ENST00000498271 K7N7A8 449 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 NDUFS8O00217 210 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 ZG16O60844 167 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 PRDX2P32119 198 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 MC5RP33032 325 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 ADIPOQQ15848 244 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 WNT10AQ9GZT5 417 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 UBTD1Q9HAC8 227 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 FBLN5Q9UBX5 448 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 CACNA1IQ9P0X4 2223 aa12.85□□□□□ -0.35
C4A-259ENST00000498271 RBFOX2O43251 390 aaKnown RBP eCLIP12.84□□□□□ -0.35
C4A-259ENST00000498271 SCGB1A1P11684 91 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 GPX4P36969 197 aaPredicted RBP12.84□□□□□ -0.35
C4A-259ENST00000498271 TTC9CQ8N5M4 171 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 DNASE2BQ8WZ79 361 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 ZNF646O15015 1829 aaPredicted RBP12.84□□□□□ -0.35
C4A-259ENST00000498271 SCN2AQ99250 2005 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 DOCK4Q8N1I0 1966 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 SOX8P57073 446 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 NPCDR1Q9BY65 106 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 DLEU1O43261 78 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 ADRA2AP08913 450 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 RPL23P62829 140 aaKnown RBP12.84□□□□□ -0.35
C4A-259ENST00000498271 DCAF10Q5QP82 559 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 DLL3Q9NYJ7 618 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 MOGAT3Q86VF5 341 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 MUC15Q8N387 334 aa12.84□□□□□ -0.35
C4A-259ENST00000498271 C16orf97H3BN30 126 aa12.83□□□□□ -0.35
C4A-259ENST00000498271 RPL31P62899 125 aaKnown RBP12.83□□□□□ -0.35
C4A-259ENST00000498271 SRSF3P84103 164 aaKnown RBP12.83□□□□□ -0.35
C4A-259ENST00000498271 IZUMO4Q1ZYL8 232 aa12.83□□□□□ -0.35
C4A-259ENST00000498271 ARTNQ5T4W7 220 aa12.83□□□□□ -0.35
C4A-259ENST00000498271 TMPRSS2O15393 492 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 COX5BP10606 129 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 FBXW9Q5XUX1 488 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 ASPHD2Q6ICH7 369 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 BHLHA15Q7RTS1 189 aaPredicted RBP12.83□□□□□ -0.36
C4A-259ENST00000498271 OR51G1Q8NGK1 321 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 SAP25Q8TEE9 199 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 DERL1Q9BUN8 251 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 INSIG2Q9Y5U4 225 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 SPTBP11277 2137 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 CCL17Q92583 94 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 NABP2Q9BQ15 211 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 PRDM14Q9GZV8 571 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 NRN1Q9NPD7 142 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 TNFSF13O75888 250 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 COX7A1P24310 79 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 EMP1P54849 157 aa12.83□□□□□ -0.36
C4A-259ENST00000498271 C1QTNF9BB2RNN3 333 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 RPL27AP46776 148 aaKnown RBP12.82□□□□□ -0.36
C4A-259ENST00000498271 PSG9Q00887 426 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 FAM169BQ8N8A8 192 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 SCN5AQ14524 2016 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 TRAV9-2A0A087WT02 112 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 A0A1W2PQM1 296 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 RPL8P62917 257 aaKnown RBP12.82□□□□□ -0.36
C4A-259ENST00000498271 ZNF146Q15072 292 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 NR2C2APQ86WQ0 139 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 F11RQ9Y624 299 aaKnown RBP12.82□□□□□ -0.36
C4A-259ENST00000498271 OR11H12B2RN74 326 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 SPTA1P02549 2419 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 MEF2CQ06413 473 aaPredicted RBP12.82□□□□□ -0.36
C4A-259ENST00000498271 STPG3Q8N7X2 389 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 OR11H2Q8NH07 326 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 ZNF488Q96MN9 340 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 ZNF714Q96N38 554 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 A0A1B0GWB2 263 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 IZUMO1RA6ND01 250 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 LGALS3P17931 250 aaKnown RBP12.82□□□□□ -0.36
C4A-259ENST00000498271 LINC00114Q6XXX2 140 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 TCF23Q7RTU1 214 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 JPT1Q9UK76 154 aa12.82□□□□□ -0.36
C4A-259ENST00000498271 TRPM7Q96QT4 1865 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 SERF1AO75920 110 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 IGFBP3P17936 291 aaPredicted RBP12.81□□□□□ -0.36
C4A-259ENST00000498271 OR10J3Q5JRS4 329 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 PNKDQ8N490 385 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 WDR31Q8NA23 367 aa12.81□□□□□ -0.36
C4A-259ENST00000498271 SRSF12Q8WXF0 261 aaKnown RBP12.81□□□□□ -0.36
C4A-259ENST00000498271 TTTY12Q9BZ98 90 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms