RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 MEIKINA0A087WXM9 373 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 CENPVL3A0A0U1RRI6 287 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 DHRS12A0PJE2 317 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SMIM9A6NGZ8 99 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 C5orf58C9J3I9 102 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 C11orf94C9JXX5 98 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 INMT-MINDY4F8WBC2 141 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SLC37A4O43826 429 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 RDH16O75452 317 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 CFDP00746 253 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SMIM10L2AP0DMW4 78 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SMIM10L2BP0DMW5 78 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 FGF7P21781 194 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 PSMB9P28065 219 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 RPL12P30050 165 aaKnown RBP3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SDC4P31431 198 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 PYCR1P32322 319 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 EVX1P49640 407 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 FGF8P55075 233 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-212ENST00000496458 TMEM33P57088 247 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 CACNG7P62955 275 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 PPP3R1P63098 170 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 ARG2P78540 354 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 FMODQ06828 376 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 KIAA0087Q14695 138 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 MAPK14Q16539 360 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 HIST3H3Q16695 136 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 LCN8Q6JVE9 175 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 TCF24Q7RTU0 167 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 DEFB128Q7Z7B8 93 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 LRRC25Q8N386 305 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF555Q8NEP9 628 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 OR10A6Q8NH74 314 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 OR1S1Q8NH92 325 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 GEMIN6Q8WXD5 167 aaKnown RBP3.17□□□□□ -1.9
SF3B1-212ENST00000496458 PPCDCQ96CD2 204 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 IMP4Q96G21 291 aaKnown RBP3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SMARCD1Q96GM5 515 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SMIM8Q96KF7 97 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 PHB2Q99623 299 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 AIF1LQ9BQI0 150 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 TAPBPLQ9BX59 468 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 GABARAPL3Q9BY60 117 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 LHX9Q9NQ69 397 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 RASL12Q9NYN1 266 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 GNG8Q9UK08 70 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 SLC35A3Q9Y2D2 325 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 PCYT1BQ9Y5K3 369 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-212ENST00000496458 V9GYH0 126 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 V9GYS6 101 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 TRIP11Q15643 1979 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 EYSQ5T1H1 3165 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 MICAL3Q7RTP6 2002 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 UNC80Q8N2C7 3258 aa3.17□□□□□ -1.9
SF3B1-212ENST00000496458 C5orf42Q9H799 3197 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 A0A087WUJ7 227 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 A0A1B0GV72 72 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 RPL36A-HNRNPH2H7BZ11 118 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 XKRYO14609 159 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 PLA2G10O15496 165 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 CYB5R3P00387 301 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-212ENST00000496458 CD2P06729 351 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 C1GALT1C1LP0DN25 315 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 IGHV3-43DP0DP04 118 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF14P17017 642 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-212ENST00000496458 ATF1P18846 271 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 KDELR1P24390 212 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 CXCR1P25024 350 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 MAP2K4P45985 399 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 SLC35A2P78381 396 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 MRPS10P82664 201 aaKnown RBP3.16□□□□□ -1.9
SF3B1-212ENST00000496458 SKP2Q13309 424 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 RSU1Q15404 277 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 LRRC75BQ2VPJ9 315 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 PYCR3Q53H96 274 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 GLYATQ6IB77 296 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 EIF5AL1Q6IS14 154 aaKnown RBP3.16□□□□□ -1.9
SF3B1-212ENST00000496458 TNFAIP8L2Q6P589 184 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-212ENST00000496458 ALKAL1Q6UXT8 129 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 ZNF720Q7Z2F6 126 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 BAP18Q8IXM2 172 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 UBAC2Q8NBM4 344 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 OR13C8Q8NGS7 320 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 OR11L1Q8NGX0 322 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 OR10X1Q8NGY0 326 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 OR6K3Q8NGY3 331 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 OR4C6Q8NH72 309 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 LRRC29Q8WV35 223 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 CANT1Q8WVQ1 401 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 RERGQ96A58 199 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-212ENST00000496458 OR10C1Q96KK4 312 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 OR2M4Q96R27 311 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 METTL26Q96S19 204 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 GINS4Q9BRT9 223 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 FAAP24Q9BTP7 215 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 RSPO3Q9BXY4 272 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-212ENST00000496458 SEC11CQ9BY50 192 aa3.16□□□□□ -1.9
SF3B1-212ENST00000496458 TMEM100Q9NV29 134 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms