RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 RBFOX2O43251 390 aaKnown RBP eCLIP11.15□□□□□ -0.62
CXCL12-208ENST00000496375 LY86O95711 162 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 CRYGBP07316 175 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 RAB9AP51151 201 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 BCAP31P51572 246 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 CRIP2P52943 208 aaPredicted RBP11.15□□□□□ -0.62
CXCL12-208ENST00000496375 BRWD1-AS2P59051 145 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 IFITM3Q01628 133 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 PSG5Q15238 335 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 RNASE10Q5GAN6 216 aaKnown RBP11.15□□□□□ -0.62
CXCL12-208ENST00000496375 AADACL3Q5VUY0 350 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 ZNF818PQ6ZRF7 136 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 PRELID3BQ9Y3B1 194 aa11.15□□□□□ -0.62
CXCL12-208ENST00000496375 RYR2Q92736 4967 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 ANKRD20A5PA0PJZ0 165 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 PTTG1O95997 202 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 ZNF735P0CB33 412 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 KIR2DS2P43631 304 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 INSL3P51460 131 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 FXYD4P59646 89 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 NDPQ00604 133 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 CBX3Q13185 183 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 ECSCRQ19T08 205 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 RNASE12Q5GAN4 147 aaKnown RBP11.14□□□□□ -0.63
CXCL12-208ENST00000496375 STEAP1BQ6NZ63 245 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 TINAGL1Q9GZM7 467 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-208ENST00000496375 SORL1Q92673 2214 aa11.14□□□□□ -0.63
CXCL12-208ENST00000496375 A0A1W2PN81 502 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 M0QYG6 137 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 CHRNA7P36544 502 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 TSPAN5P62079 268 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 RPS16P62249 146 aaKnown RBP11.13□□□□□ -0.63
CXCL12-208ENST00000496375 CATR1Q13166 79 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 MEF2DQ14814 521 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 LPCAT3Q6P1A2 487 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 OR4D10Q8NGI6 311 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 OR4S2Q8NH73 311 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 DCUN1D4Q92564 292 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 RSRP1Q9BUV0 290 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 ALX4Q9H161 411 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-208ENST00000496375 FBXL15Q9H469 300 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 FAM212BQ9NTI7 297 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-208ENST00000496375 FBXO7Q9Y3I1 522 aa11.13□□□□□ -0.63
CXCL12-208ENST00000496375 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
CXCL12-208ENST00000496375 GPR31O00270 319 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 OVOL1O14753 267 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 SOX15O60248 233 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 RAB3DO95716 219 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 CRYZL1O95825 349 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 AKAIN1P0CW23 69 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 UBE2KP61086 200 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 CX3CL1P78423 397 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 PLGLAQ15195 96 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 MRGPRG-AS1Q2M3A8 158 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 SLC38A6Q8IZM9 456 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 GDPD1Q8N9F7 314 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 TEX45Q8NA69 505 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 POC5Q8NA72 575 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 CASTOR1Q8WTX7 329 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 TCTEX1D2Q8WW35 142 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 ZNF486Q96H40 463 aaPredicted RBP11.12□□□□□ -0.63
CXCL12-208ENST00000496375 SLC2A8Q9NY64 477 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 METTL1Q9UBP6 276 aaKnown RBP11.12□□□□□ -0.63
CXCL12-208ENST00000496375 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
CXCL12-208ENST00000496375 SMAD5-AS1Q9Y6J3 95 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
CXCL12-208ENST00000496375 SACSQ9NZJ4 4579 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 SHOXO15266 292 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 SLC25A17O43808 307 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 FCGR3BO75015 233 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 SAP30O75446 220 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 PGLYRP1O75594 196 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-208ENST00000496375 IFNA6P05013 189 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 SLURP1P55000 103 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 RND3P61587 244 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 SSBP2P81877 361 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-208ENST00000496375 POU2AF1Q16633 256 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 ZNF429Q86V71 674 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 PPP1R27Q86WC6 154 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 CMTM1Q8IZ96 169 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 CADM3Q8N126 398 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 Q8N402 240 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 OR4C16Q8NGL9 310 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 TERB2Q8NHR7 220 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 CD300LFQ8TDQ1 290 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 DLX4Q92988 240 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-208ENST00000496375 MRGPRFQ96AM1 343 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 THAP7Q9BT49 309 aaPredicted RBP11.11□□□□□ -0.63
CXCL12-208ENST00000496375 SRRQ9GZT4 340 aa11.11□□□□□ -0.63
CXCL12-208ENST00000496375 LINC01619G3V211 115 aa11.1□□□□□ -0.63
CXCL12-208ENST00000496375 FCN1O00602 326 aa11.1□□□□□ -0.63
CXCL12-208ENST00000496375 TNFSF12O43508 249 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms