RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TMEM17Q86X19 198 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 TTC9CQ8N5M4 171 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 OR9G4Q8NGQ1 327 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 CD300LFQ8TDQ1 290 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 CMTM3Q96MX0 182 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 FUNDC2Q9BWH2 189 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 BET1LQ9NYM9 111 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 EHFQ9NZC4 300 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 MEIS3P1A6NDR6 274 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 TNFSF12O43508 249 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 IGLV1-51P01701 117 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 APOA1P02647 267 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 ZNF735P0CB33 412 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 NAT1P18440 290 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 RPL27AP46776 148 aaKnown RBP12.04□□□□□ -0.48
HDAC4-213ENST00000496347 TAS2R31P59538 309 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 NCS1P62166 190 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
HDAC4-213ENST00000496347 ZNF45Q02386 682 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 RPEL1Q2QD12 228 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 ZNF818PQ6ZRF7 136 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 SPAG16Q8N0X2 631 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 RSRP1Q9BUV0 290 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 AKIP1Q9NQ31 210 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 COMMD9Q9P000 198 aa12.04□□□□□ -0.48
HDAC4-213ENST00000496347 SULT1C2O00338 296 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 RBMXL2O75526 392 aaKnown RBP12.03□□□□□ -0.48
HDAC4-213ENST00000496347 TRBV12-3P01733 135 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 FCER2P06734 321 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 HLA-GP17693 338 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 POU2AF1Q16633 256 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 AADACL3Q5VUY0 350 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 OR4A47Q6IF82 309 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 ANKRD13BQ86YJ7 626 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 OR5H2Q8NGV7 314 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 WWC2-AS2Q96NR7 200 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 SCPEP1Q9HB40 452 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 SLC2A9Q9NRM0 540 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 ADAM30Q9UKF2 790 aa12.03□□□□□ -0.48
HDAC4-213ENST00000496347 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.02□□□□□ -0.49
HDAC4-213ENST00000496347 DPPA5A6NC42 116 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 DHFRP00374 187 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 HPRT1P00492 218 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 PRH1P02810 166 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 EIF4EP06730 217 aaKnown RBP12.02□□□□□ -0.49
HDAC4-213ENST00000496347 NQO2P16083 231 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 PRSS3P35030 304 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 SYNJ2BPP57105 145 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 TATDN3Q17R31 274 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 C15orf32Q32M92 178 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 DHRS11Q6UWP2 260 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 OR51H1Q8NH63 302 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 PLEKHA2Q9HB19 425 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 U3KQK5 164 aa12.02□□□□□ -0.49
HDAC4-213ENST00000496347 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 SMIM31A0A1B0GVY4 71 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 GABARAPO95166 117 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-213ENST00000496347 SMIM18P0DKX4 95 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 GNRHRP30968 328 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 VBP1P61758 197 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 CMTM1Q8IZ96 169 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 AP3S1Q92572 193 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 FYTTD1Q96QD9 318 aaKnown RBP12.01□□□□□ -0.49
HDAC4-213ENST00000496347 SRSF8Q9BRL6 282 aaKnown RBP12.01□□□□□ -0.49
HDAC4-213ENST00000496347 ZNF2Q9BSG1 426 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-213ENST00000496347 HRASLSQ9HDD0 168 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
HDAC4-213ENST00000496347 KMT2CQ8NEZ4 4911 aaKnown RBP12□□□□□ -0.49
HDAC4-213ENST00000496347 A0A1B0GW64 132 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 HMX3A6NHT5 357 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 BMPR1BO00238 502 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 RLN1P04808 185 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 CRYGCP07315 174 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 AREGP15514 252 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 RCVRNP35243 200 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 HRH1P35367 487 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 RFX2P48378 723 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 RORCP51449 518 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 ERVK-16P61578 105 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 KLK9Q2XQG4 91 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 THOC7Q6I9Y2 204 aaKnown RBP12□□□□□ -0.49
HDAC4-213ENST00000496347 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 GPX8Q8TED1 209 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 FXYD6Q9H0Q3 95 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 TMEM140Q9NV12 185 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 COMMD3Q9UBI1 195 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 KLK9Q9UKQ9 250 aa12□□□□□ -0.49
HDAC4-213ENST00000496347 HUWE1Q7Z6Z7 4374 aaKnown RBP12□□□□□ -0.49
HDAC4-213ENST00000496347 MARCH11A6NNE9 402 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 H0Y980 276 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 OR2J3O76001 311 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 S1PR2O95136 353 aa11.99□□□□□ -0.49
HDAC4-213ENST00000496347 PMP2P02689 132 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms