RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 TSPAN5P62079 268 aa13.57□□□□□ -0.24
RHBDD3-207ENST00000496342 OR4A47Q6IF82 309 aa13.57□□□□□ -0.24
RHBDD3-207ENST00000496342 MMD2Q8IY49 270 aa13.57□□□□□ -0.24
RHBDD3-207ENST00000496342 OR6F1Q8NGZ6 308 aa13.57□□□□□ -0.24
RHBDD3-207ENST00000496342 TMEM167AQ8TBQ9 72 aa13.57□□□□□ -0.24
RHBDD3-207ENST00000496342 OR2A7Q96R45 310 aa13.57□□□□□ -0.24
RHBDD3-207ENST00000496342 NOL3O60936 208 aaKnown RBP13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 PGLYRP1O75594 196 aaPredicted RBP13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 DUS4LO95620 317 aaKnown RBP13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 ADAD2Q8NCV1 583 aaKnown RBP13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 OR4D10Q8NGI6 311 aa13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 MRAPQ8TCY5 172 aa13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 DCUN1D4Q92564 292 aa13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 BCL7BQ9BQE9 202 aa13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 C6orf62Q9GZU0 229 aaPredicted RBP13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 SLA2Q9H6Q3 261 aa13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 SCOCQ9UIL1 159 aa13.56□□□□□ -0.24
RHBDD3-207ENST00000496342 WI2-2373I1.2A0A1W2PRP0 233 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 TEX22C9J3V5 150 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 GPR31O00270 319 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 ACTL6BO94805 426 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 CD3DP04234 171 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 OR8U8P0C7N1 319 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 ZNF45Q02386 682 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 FAAP20Q6NZ36 180 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 DPF1Q92782 380 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 DLX4Q92988 240 aaPredicted RBP13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 FYTTD1Q96QD9 318 aaKnown RBP13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 HRASLSQ9HDD0 168 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 MTFP1Q9UDX5 166 aa13.55□□□□□ -0.24
RHBDD3-207ENST00000496342 ANKRD34BA5PLL1 514 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 CGB1A6NKQ9 187 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 LINC01619G3V211 115 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 K7EIL1 84 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 CREBL2O60519 120 aaPredicted RBP13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 HPRT1P00492 218 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 HRASP01112 189 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 TRBV12-3P01733 135 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 OR9G9P0C7N8 305 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 CD40LGP29965 261 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 PPP5CP53041 499 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 EGFEM1PQ0D2K5 195 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 VAX1Q5SQQ9 334 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 VSTM2AQ8TAG5 236 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 FCAMRQ8WWV6 532 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 DIRAS2Q96HU8 199 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 TMEM140Q9NV12 185 aa13.54□□□□□ -0.24
RHBDD3-207ENST00000496342 C13orf42A0A1B0GVH6 325 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 CCDC160A6NGH7 325 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 H3BUA1 57 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 REG1AP05451 166 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 AREGP15514 252 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 PI3P19957 117 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 LPAR6P43657 344 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 TAS2R31P59538 309 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 IL18Q14116 193 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 ZNF585BQ52M93 769 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 RNASE10Q5GAN6 216 aaKnown RBP13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 TMEM68Q96MH6 324 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 RSRP1Q9BUV0 290 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
RHBDD3-207ENST00000496342 NQO2P16083 231 aa13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 RPL8P62917 257 aaKnown RBP13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 TBC1D26Q86UD7 250 aa13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 DMBX1Q8NFW5 382 aa13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 DGCR14Q96DF8 476 aaKnown RBP13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 SPIN2AQ99865 258 aa13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 SPIN2BQ9BPZ2 258 aa13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 RBM38Q9H0Z9 239 aaKnown RBP13.52□□□□□ -0.25
RHBDD3-207ENST00000496342 GABARAPH6UMI1 98 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 UPK2O00526 184 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 OVOL1O14753 267 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 HSPB1P04792 205 aaKnown RBP13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 ZNF735P0CB33 412 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 PGAM2P15259 253 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 HLA-GP17693 338 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 F2RP25116 425 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 G6PCP35575 357 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 RHOGP84095 191 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 POU2AF1Q16633 256 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 C9orf66Q5T8R8 295 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 REC114Q7Z4M0 266 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 LHFPL1Q86WI0 220 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 CMTM1Q8IZ96 169 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 TTC9CQ8N5M4 171 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 MCFD2Q8NI22 146 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 BORCS5Q969J3 196 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 PLEKHA2Q9HB19 425 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 AKIP1Q9NQ31 210 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 COMMD9Q9P000 198 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 NSG2Q9Y328 171 aa13.51□□□□□ -0.25
RHBDD3-207ENST00000496342 MARCH11A6NNE9 402 aa13.5□□□□□ -0.25
RHBDD3-207ENST00000496342 OR2J3O76001 311 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms