RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ARF6P62330 175 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 BLOC1S1P78537 153 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 LILRB2Q8N423 598 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 BEND2Q8NDZ0 799 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 OR4P4Q8NGL7 312 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 LHX4Q969G2 390 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 FLYWCH2Q96CP2 140 aaKnown RBP11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 GNPNAT1Q96EK6 184 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 HARBI1Q96MB7 349 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 PCGF1Q9BSM1 259 aa11.08□□□□□ -0.64
SPTBN1-205ENST00000496323 IGHV4-39P01824 125 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 RAB5CP51148 216 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 HSPE1P61604 102 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 SRSF3P84103 164 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 LRRC75BQ2VPJ9 315 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 THNSL2Q86YJ6 484 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 PDPNQ86YL7 162 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 PUSL1Q8N0Z8 303 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 TMEM170AQ8WVE7 144 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 RITA1Q96K30 269 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 BET1LQ9NYM9 111 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 ASH1LQ9NR48 2969 aaKnown RBP11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 hCG_1809904A0A1W2PP81 198 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 A0A1W2PPE2 198 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 A0A1W2PR64 198 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 A0A1W2PRV1 198 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 RAB19A4D1S5 217 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 IGHV2-5P01817 119 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 IL3RAP26951 378 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 LDLRAD2Q5SZI1 272 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 PNKDQ8N490 385 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 OR4C13Q8NGP0 309 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 RSG1Q9BU20 258 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 SIRT7Q9NRC8 400 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 PRNDQ9UKY0 176 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 WASHC3Q9Y3C0 194 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 OR51B2Q9Y5P1 312 aa11.07□□□□□ -0.64
SPTBN1-205ENST00000496323 TACC2O95359 2948 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 IGHV3-72A0A0B4J1Y9 119 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 LY6LH3BQJ8 138 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 RRHO14718 337 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 ZP3P21754 424 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 F2RL1P55085 397 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 PJVKQ0ZLH3 352 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 HCP5Q6MZN7 132 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 BPIFCQ8NFQ6 507 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 OR10P1Q8NGE3 313 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 WDR61Q9GZS3 305 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 HEYLQ9NQ87 328 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-205ENST00000496323 UBE2L5PA0A1B0GUS4 154 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 TRIM77I1YAP6 450 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 M0R1W7 72 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 KBTBD11O94819 623 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 LY86O95711 162 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 PRH1P02810 166 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 CAMLGP49069 296 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 TUSC1Q2TAM9 212 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 SLC25A24Q6NUK1 477 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 IL34Q6ZMJ4 242 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 SCGB1C1Q8TD33 95 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 AIFM2Q9BRQ8 373 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 PARD6GQ9BYG4 376 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 HIPK2Q9H2X6 1198 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 FBXO7Q9Y3I1 522 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 NUDT19A8MXV4 375 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 UMAD1C9J7I0 102 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 OPN1MWP04001 364 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 OPN1MW2P0DN77 364 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 OPN1MW3P0DN78 364 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 MC5RP33032 325 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 HOXA1P49639 335 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 PAX2Q02962 417 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 AKR1C1Q04828 323 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 ZNF616Q08AN1 781 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 VWC2Q2TAL6 325 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 FAM213BQ8TBF2 198 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 PINX1Q96BK5 328 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 ZNF257Q9Y2Q1 563 aa11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 SPTAN1Q13813 2472 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-205ENST00000496323 IGHV1-3A0A0C4DH29 117 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 TEX50A0A1B0GTY4 177 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 AGPAT2O15120 278 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 IFNA10P01566 189 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 OR8U8P0C7N1 319 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 PRTN3P24158 256 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 RAB13P51153 203 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 LMO4P61968 165 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 ATP6V1FQ16864 119 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 UQCC3Q6UW78 93 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 OR11H6Q8NGC7 330 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 TAF15Q92804 592 aaKnown RBP eCLIP11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 MS4A7Q9GZW8 240 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 UBR5O95071 2799 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 KRBOX1C9JBD0 128 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 PRSS46E5RG02 174 aa11.04□□□□□ -0.64
SPTBN1-205ENST00000496323 PRCDQ00LT1 54 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms