RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 SIGLEC9Q9Y336 463 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 TMED3Q9Y3Q3 217 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 MMP24Q9Y5R2 645 aa17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 NIPBLQ6KC79 2804 aaeCLIP17.36■□□□□ 0.37
ECHDC3-205ENST00000496136 SPDEFO95238 335 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 C2orf68Q2NKX9 166 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 NMSQ5H8A3 153 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 CADM3Q8N126 398 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 Q8N9W7 124 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 VSTM2AQ8TAG5 236 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 GPR146Q96CH1 333 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 BET1LQ9NYM9 111 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 TRAV3A0A0B4J244 114 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 CHST1O43916 411 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 C5orf64Q2M2E5 130 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 GGNBP1Q5YKI7 109 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 Q6ZRM9 215 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 FAM219AQ8IW50 185 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 RNASE11Q8TAA1 199 aaKnown RBP17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 RAB18Q9NP72 206 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 TPSG1Q9NRR2 321 aa17.35■□□□□ 0.37
ECHDC3-205ENST00000496136 DNAJC9-AS1A6NH13 148 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 MPTX1A8MV57 137 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 KBTBD11O94819 623 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 OR9G9P0C7N8 305 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 MRGPRG-AS1Q2M3A8 158 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 C16orf82Q7Z2V1 217 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 PPP1R27Q86WC6 154 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 MOB4Q9Y3A3 225 aa17.34■□□□□ 0.37
ECHDC3-205ENST00000496136 AMY1AP04745 511 aa17.33■□□□□ 0.37
ECHDC3-205ENST00000496136 HILS1P60008 231 aa17.33■□□□□ 0.37
ECHDC3-205ENST00000496136 PJVKQ0ZLH3 352 aa17.33■□□□□ 0.37
ECHDC3-205ENST00000496136 C5orf56Q8N8D9 126 aa17.33■□□□□ 0.37
ECHDC3-205ENST00000496136 TMEM167AQ8TBQ9 72 aa17.33■□□□□ 0.37
ECHDC3-205ENST00000496136 A0A1B0GVG6 124 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 CLDN34H7C241 214 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 UPK2O00526 184 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 FCN1O00602 326 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 FGF16O43320 207 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 IFNA21P01568 189 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 HLA-GP17693 338 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 PLGLAQ15195 96 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 MED28Q9H204 178 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 RANBP3Q9H6Z4 567 aaPredicted RBP17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 NSG2Q9Y328 171 aa17.33■□□□□ 0.36
ECHDC3-205ENST00000496136 CCSO14618 274 aa17.32■□□□□ 0.36
ECHDC3-205ENST00000496136 RELBQ01201 579 aa17.32■□□□□ 0.36
ECHDC3-205ENST00000496136 OR4A5Q8NH83 315 aa17.32■□□□□ 0.36
ECHDC3-205ENST00000496136 CLCC1Q96S66 551 aa17.32■□□□□ 0.36
ECHDC3-205ENST00000496136 ZNF430Q9H8G1 570 aaPredicted RBP17.32■□□□□ 0.36
ECHDC3-205ENST00000496136 PRSS8Q16651 343 aa17.31■□□□□ 0.36
ECHDC3-205ENST00000496136 OR10C1Q96KK4 312 aa17.31■□□□□ 0.36
ECHDC3-205ENST00000496136 RASL11BQ9BPW5 248 aa17.31■□□□□ 0.36
ECHDC3-205ENST00000496136 CACNG5Q9UF02 275 aa17.31■□□□□ 0.36
ECHDC3-205ENST00000496136 NF1P21359 2839 aa17.31■□□□□ 0.36
ECHDC3-205ENST00000496136 M0QZK8 103 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 RRAS2P62070 204 aaPredicted RBP17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 TET2Q6N021 2002 aaPredicted RBP17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 A0A1B0GU03 582 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 C13orf42A0A1B0GVH6 325 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 GOSR2O14653 212 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 SNAPC5O75971 98 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 RPL8P62917 257 aaKnown RBP17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 BLCAPP62952 87 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 FCN2Q15485 313 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 OR4A16Q8NH70 328 aa17.3■□□□□ 0.36
ECHDC3-205ENST00000496136 hCG_2014768A0A024R1R8 64 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 SH2D7A6NKC9 451 aaPredicted RBP17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 FAM25EA8MYX2 175 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 GPR137BO60478 399 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 SIX6O95475 246 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 SLC25A6P12236 298 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 CXCL3P19876 107 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 MMD2Q8IY49 270 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 JMJD8Q96S16 334 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 COA4Q9NYJ1 87 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 MGAT4CQ9UBM8 478 aa17.29■□□□□ 0.36
ECHDC3-205ENST00000496136 C5orf51A6NDU8 294 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 SULT1A3P0DMM9 295 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 SULT1A4P0DMN0 295 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 OR2B8PP59922 312 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 SMCO1Q147U7 214 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 GSG1LQ6UXU4 331 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 OR11H7Q8NGC8 314 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 OR5M8Q8NGP6 311 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 TMEM14BQ9NUH8 114 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 TCF21O43680 179 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 PITX3O75364 302 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 RBMXL2O75526 392 aaKnown RBP17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 CA2P00918 260 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 HLA-DRB1P01911 266 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 FGF2P09038 288 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 H2BFSP57053 126 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 SSBP2P81877 361 aaPredicted RBP17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 IAH1Q2TAA2 248 aaPredicted RBP17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 ZNF562Q6V9R5 426 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 PRNDQ9UKY0 176 aa17.28■□□□□ 0.36
ECHDC3-205ENST00000496136 JMJD1CQ15652 2540 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 FAM181BA6NEQ2 426 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms