RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PPYP01298 95 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 FCER2P06734 321 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 IL6RP08887 468 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-214ENST00000496043 RPS19P39019 145 aaKnown RBP9.72□□□□□ -0.85
PTPRF-214ENST00000496043 EXOSC2Q13868 293 aaKnown RBP9.72□□□□□ -0.85
PTPRF-214ENST00000496043 C10orf55Q5SWW7 151 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 SGPP2Q8IWX5 399 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 SPAG16Q8N0X2 631 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 OR13F1Q8NGS4 319 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 OR4A5Q8NH83 315 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 FYTTD1Q96QD9 318 aaKnown RBP9.72□□□□□ -0.85
PTPRF-214ENST00000496043 SLC2A9Q9NRM0 540 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 ADAM30Q9UKF2 790 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 ZNF257Q9Y2Q1 563 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 TNCP24821 2201 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.71□□□□□ -0.86
PTPRF-214ENST00000496043 NPIPB5A8MRT5 1133 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 TEX22C9J3V5 150 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 C3orf84H3BNL1 204 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 OR2J3O76001 311 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 DHFRP00374 187 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 IGHV4-30-4P0DP06 118 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 FXYD4P59646 89 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 RPL8P62917 257 aaKnown RBP9.71□□□□□ -0.86
PTPRF-214ENST00000496043 CATR1Q13166 79 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 SSX9Q7RTT3 188 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 TSPAN14Q8NG11 270 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 BORCS5Q969J3 196 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
PTPRF-214ENST00000496043 YIPF6Q96EC8 236 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 RCHY1Q96PM5 261 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 GPHA2Q96T91 129 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 IFT46Q9NQC8 304 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 FBXL7Q9UJT9 491 aa9.71□□□□□ -0.86
PTPRF-214ENST00000496043 MEIS3P1A6NDR6 274 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 A8MZ25 164 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 E7EUB6 86 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 BMPR1BO00238 502 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 SULT1C2O00338 296 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 RBFOX2O43251 390 aaKnown RBP eCLIP9.7□□□□□ -0.867e-9■■■□□ 17
PTPRF-214ENST00000496043 HPRT1P00492 218 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 CRYGCP07315 174 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 ZNF735P0CB33 412 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 HLA-GP17693 338 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 TGFBR1P36897 503 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 MECP2P51608 486 aaKnown RBP9.7□□□□□ -0.86
PTPRF-214ENST00000496043 LSM3P62310 102 aaKnown RBP9.7□□□□□ -0.86
PTPRF-214ENST00000496043 C15orf32Q32M92 178 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 UBE2NLQ5JXB2 153 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 LCN12Q6JVE5 192 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 DHRS11Q6UWP2 260 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 Q8N402 240 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 OR2K2Q8NGT1 345 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 CD300LFQ8TDQ1 290 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 HRASLSQ9HDD0 168 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 C19orf73Q9NVV2 129 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 BET1LQ9NYM9 111 aa9.7□□□□□ -0.86
PTPRF-214ENST00000496043 GGCTO75223 188 aaKnown RBP9.69□□□□□ -0.86
PTPRF-214ENST00000496043 NDUFB8O95169 186 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 TNFAIP8O95379 198 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 DEFA4P12838 97 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 NQO2P16083 231 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 HIST1H1BP16401 226 aaKnown RBP9.69□□□□□ -0.86
PTPRF-214ENST00000496043 PSMB6P28072 239 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 TAS2R31P59538 309 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 HERV-K104P61576 105 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 TMEM69Q5SWH9 247 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 OR4A47Q6IF82 309 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 ZNF818PQ6ZRF7 136 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 GTSCR1Q86UQ5 136 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 SAMD12Q8N8I0 201 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 EHFQ9NZC4 300 aa9.69□□□□□ -0.86
PTPRF-214ENST00000496043 TENM3Q9P273 2699 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 UPK2O00526 184 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 OR2C1O95371 312 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 AREGP15514 252 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 CTRB1P17538 263 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 GNRHRP30968 328 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 PRSS3P35030 304 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 RFX2P48378 723 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 TAS2R20P59543 309 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 AADACL3Q5VUY0 350 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 CTRB2Q6GPI1 263 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 TMEM17Q86X19 198 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 TUBA4BQ9H853 241 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 PLEKHA2Q9HB19 425 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 DMRT1Q9Y5R6 373 aa9.68□□□□□ -0.86
PTPRF-214ENST00000496043 SMIM31A0A1B0GVY4 71 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 A0A1B0GW64 132 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 PPP5D1E7EU14 171 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 PMP2P02689 132 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 MYOD1P15172 320 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 NAT1P18440 290 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 TAS2R46P59540 309 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 POU2AF1Q16633 256 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 FAM106AQ4KMX7 169 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms