RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZNF430Q9H8G1 570 aaPredicted RBP9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 FAM212BQ9NTI7 297 aaPredicted RBP9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 PTTG2Q9NZH5 202 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 TEX13DA0A0J9YY54 714 aaPredicted RBP9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 A0A1W2PN81 502 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 MARCH11A6NNE9 402 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 CENPXA8MT69 81 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 G3V318 75 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 IGHG4P01861 327 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 ELANEP08246 267 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 CHRNA7P36544 502 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 NDPQ00604 133 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 FOXE3Q13461 319 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 BAK1Q16611 211 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 AKIRIN2Q53H80 203 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 HIST2H2BDQ6DRA6 164 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 OR4A47Q6IF82 309 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 LFNGQ8NES3 379 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 TMEM167AQ8TBQ9 72 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 ZFP57Q9NU63 452 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 BET1LQ9NYM9 111 aa9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 FOXA2Q9Y261 457 aaPredicted RBP9.49□□□□□ -0.89
CSNK1E-213ENST00000495232 C3orf85A0A1B0GTC6 90 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 NUDT19A8MXV4 375 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 H0Y980 276 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 ARPC1BO15143 372 aaKnown RBP9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 B3GALNT1O75752 331 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 ATG12O94817 140 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 KRASP01116 189 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 PF4V1P10720 104 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 RPA2P15927 270 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 MAS1LP35410 378 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 CRIP2P52943 208 aaPredicted RBP9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 RPL8P62917 257 aaKnown RBP9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 CFHR3Q02985 330 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 PUSL1Q8N0Z8 303 aaKnown RBP9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 OR4F17Q8NGA8 305 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 OR5M8Q8NGP6 311 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 SRSF12Q8WXF0 261 aaKnown RBP9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 OR4F4Q96R69 305 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 SPIN2AQ99865 258 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 SPIN2BQ9BPZ2 258 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 ZNF355PQ9NSJ1 428 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 TMEM140Q9NV12 185 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 GPR132Q9UNW8 380 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 FBXO7Q9Y3I1 522 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 NUBP2Q9Y5Y2 271 aa9.48□□□□□ -0.89
CSNK1E-213ENST00000495232 PLXNB1O43157 2135 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 LINC00854A0A1B0GVQ3 168 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 NAP1L6A6NFF2 107 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 MSGN1A6NI15 193 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 SNAPC5O75971 98 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 EGR2P11161 476 aaPredicted RBP9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 IL7P13232 177 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 HLA-GP17693 338 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 PSMB8P28062 276 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 PPIFP30405 207 aaKnown RBP9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 G6PCP35575 357 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 RPL27AP46776 148 aaKnown RBP9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 POU2AF1Q16633 256 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 TRIM16LQ309B1 348 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 ZNF585BQ52M93 769 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 H2BFWTQ7Z2G1 175 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 SGPP2Q8IWX5 399 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 MINDY2Q8NBR6 621 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 MRGPRFQ96AM1 343 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 SLC25A21Q9BQT8 299 aaPredicted RBP9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 RTBDNQ9BSG5 229 aaPredicted RBP9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 COMMD5Q9GZQ3 224 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 C5orf66Q9H5L9 145 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 AKIP1Q9NQ31 210 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 KCNIP3Q9Y2W7 256 aa9.47□□□□□ -0.89
CSNK1E-213ENST00000495232 UPK2O00526 184 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 IGLV1-40P01703 118 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 APELAP0DMC3 54 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 AKR1C4P17516 323 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 AKR1C2P52895 323 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 RPL23AP62750 156 aaKnown RBP9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 MRGPRG-AS1Q2M3A8 158 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 PRR31Q5SQ13 230 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 KLHL30-AS1Q8NEE0 82 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 OR5T1Q8NG75 326 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 RNASE11Q8TAA1 199 aaKnown RBP9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 FYTTD1Q96QD9 318 aaKnown RBP9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 TP53RKQ96S44 253 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 TSC22D3Q99576 134 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 SDHCQ99643 169 aaPredicted RBP9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 C7orf50Q9BRJ6 194 aaKnown RBP9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 CCDC32Q9BV29 185 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 WDR12Q9GZL7 423 aaKnown RBP9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 NAA60Q9H7X0 242 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 COA4Q9NYJ1 87 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 FKBP11Q9NYL4 201 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 TRRAPQ9Y4A5 3859 aa9.46□□□□□ -0.9
CSNK1E-213ENST00000495232 CRYM-AS1A6NIL9 109 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms