RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 HSD17B10Q99714 261 aaKnown RBP16.65■□□□□ 0.26
HDDC3-203ENST00000494993 WFDC10AQ9H1F0 79 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 ZC4H2Q9NQZ6 224 aa16.65■□□□□ 0.26
HDDC3-203ENST00000494993 RBMY1BA6NDE4 496 aaKnown RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 RBMY1EA6NEQ0 496 aaKnown RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 NPIPB5A8MRT5 1133 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 LGALS9O00182 355 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 IL6RP08887 468 aaPredicted RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 RBMY1DP0C7P1 496 aaKnown RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 RPL27AP46776 148 aaKnown RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 EIF4EBP1Q13541 118 aaPredicted RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 CNIH2Q6PI25 160 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 PUSL1Q8N0Z8 303 aaKnown RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 TMEM167AQ8TBQ9 72 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 TCTEX1D2Q8WW35 142 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 CNBD2Q96M20 576 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 SRD5A3Q9H8P0 318 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 TECRQ9NZ01 308 aaKnown RBP16.64■□□□□ 0.25
HDDC3-203ENST00000494993 FBXL7Q9UJT9 491 aa16.64■□□□□ 0.25
HDDC3-203ENST00000494993 DPPA5A6NC42 116 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 TMEM235A6NFC5 223 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 OR11H12B2RN74 326 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 E7EUB6 86 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 OR2C1O95371 312 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 GUCA2BQ16661 112 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 FYTTD1Q96QD9 318 aaKnown RBP16.63■□□□□ 0.25
HDDC3-203ENST00000494993 VCX3BQ9H321 246 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 SLC2A9Q9NRM0 540 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 SPATA2Q9UM82 520 aa16.63■□□□□ 0.25
HDDC3-203ENST00000494993 A0A1B0GW64 132 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 NOTOA8MTQ0 251 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 JTBO76095 146 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 ZNF735P0CB33 412 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 MAS1LP35410 378 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 HSPA13P48723 471 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 BRWD1-AS2P59051 145 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 IZUMO2Q6UXV1 221 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 GPHB5Q86YW7 130 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 WDR89Q96FK6 387 aaPredicted RBP16.62■□□□□ 0.25
HDDC3-203ENST00000494993 FANCD2OSQ96PS1 177 aa16.62■□□□□ 0.25
HDDC3-203ENST00000494993 NDUFB8O95169 186 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 IGHV3-23P01764 117 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 CRYGCP07315 174 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 ARL3P36405 182 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 GNG2P59768 71 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 MFSD4AQ8N468 514 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 CCDC140Q96MF4 163 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 ANXA10Q9UJ72 324 aa16.61■□□□□ 0.25
HDDC3-203ENST00000494993 ALMS1Q8TCU4 4167 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 SSX5O60225 188 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 SCGNO76038 276 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 AREGP15514 252 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 FGF9P31371 208 aaPredicted RBP16.6■□□□□ 0.25
HDDC3-203ENST00000494993 CLEC19AQ6UXS0 136 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 ZNF66Q6ZN08 573 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 CACNG8Q8WXS5 425 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 TXNL4BQ9NX01 149 aaKnown RBP16.6■□□□□ 0.25
HDDC3-203ENST00000494993 TAS2R8Q9NYW2 309 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 S4R3C0 116 aa16.6■□□□□ 0.25
HDDC3-203ENST00000494993 DHFRP00374 187 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 HRASP01112 189 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 CTRB1P17538 263 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 CBLN1P23435 193 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 PSMB6P28072 239 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 KLK9Q2XQG4 91 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 CTRB2Q6GPI1 263 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 EEF1AKMT3Q96AZ1 226 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 GPHA2Q96T91 129 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 DAPK2Q9UIK4 370 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 KLK9Q9UKQ9 250 aa16.59■□□□□ 0.25
HDDC3-203ENST00000494993 TMEM213A2RRL7 107 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 A8MWP6 167 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 GABARAPL2P60520 117 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 RPL8P62917 257 aaKnown RBP16.58■□□□□ 0.24
HDDC3-203ENST00000494993 UBE2UQ5VVX9 321 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 SSX9Q7RTT3 188 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 SLC16A13Q7RTY0 426 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 TPRA1Q86W33 373 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 TMEM61Q8N0U2 210 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 LGALS14Q8TCE9 139 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 SELENOKQ9Y6D0 94 aa16.58■□□□□ 0.24
HDDC3-203ENST00000494993 MRPS14O60783 128 aaKnown RBP16.57■□□□□ 0.24
HDDC3-203ENST00000494993 MYOD1P15172 320 aa16.57■□□□□ 0.24
HDDC3-203ENST00000494993 HIST1H1BP16401 226 aaKnown RBP16.57■□□□□ 0.24
HDDC3-203ENST00000494993 FAM106AQ4KMX7 169 aa16.57■□□□□ 0.24
HDDC3-203ENST00000494993 ZNF57Q68EA5 555 aaPredicted RBP16.57■□□□□ 0.24
HDDC3-203ENST00000494993 ZNF320A2RRD8 509 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 CGB1A6NKQ9 187 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 REG1AP05451 166 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 HLA-GP17693 338 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 PSMB9P28065 219 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 MSMO1Q15800 293 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 TIMM50Q3ZCQ8 353 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 SFXN4Q6P4A7 337 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 SECTM1Q8WVN6 248 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 RHBDL2Q9NX52 303 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 BET1LQ9NYM9 111 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 MLXQ9UH92 298 aa16.56■□□□□ 0.24
HDDC3-203ENST00000494993 RRP15Q9Y3B9 282 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms