RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 FAM53AQ6NSI3 398 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 ATP5SQ99766 215 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 AGMATQ9BSE5 352 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 GPR61Q9BZJ8 451 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 CLN8Q9UBY8 286 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 RNF150Q9ULK6 438 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 IGHV1-69-2A0A0G2JMI3 117 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 SLC25A6P12236 298 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 GNLYP22749 145 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 TAS2R30P59541 319 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 CATR1Q13166 79 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 MORN2Q502X0 79 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 LBHQ53QV2 105 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 TMEM217Q8N7C4 229 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 CORO2AQ92828 525 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 LINC00574Q9H8X3 128 aa15.3■□□□□ 0.04
TSPAN4-212ENST00000494815 TRAV1-1A0A0B4J248 108 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 UQCRFS1P47985 274 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 C17orf58Q2M2W7 97 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 TMEM30BQ3MIR4 351 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 GFI1BQ5VTD9 330 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 TGIF2LXQ8IUE1 241 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 TCTEX1D1Q8N7M0 179 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 LSM10Q969L4 123 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 ITGB1BP1O14713 200 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 TGOLN2O43493 480 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 IFNA10P01566 189 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 PPOXP50336 477 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 ZNF585BQ52M93 769 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 ZNF66Q6ZN08 573 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 ITLN2Q8WWU7 325 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 MISP3Q96FF7 219 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 C5orf30Q96GV9 206 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 SLC25A10Q9UBX3 287 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 PSG11Q9UQ72 335 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 HCFC1P51610 2035 aa15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 RAI1Q7Z5J4 1906 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-212ENST00000494815 TNFRSF13BO14836 293 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 ZG16O60844 167 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 TRGC1P0CF51 173 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 ZNF16P17020 682 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 DDTP30046 118 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 RND2P52198 227 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 LTC4SQ16873 150 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 TCF23Q7RTU1 214 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 FAM210BQ96KR6 192 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 HSD17B10Q99714 261 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 TMEM242Q9NWH2 141 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 TANC2Q9HCD6 1990 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 ABCA4P78363 2273 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 A0A1B0GU03 582 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 hADV38S2A0JD32 116 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 CHST1O43916 411 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 MEF2CQ06413 473 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 PNRC1Q12796 327 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 PDZD11Q5EBL8 140 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 FAM90A2PQ658T7 463 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 ABHD5Q8WTS1 349 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 FRZBQ92765 325 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 LINC00312Q9Y6C7 94 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 DSCAML1Q8TD84 2053 aa15.28■□□□□ 0.04
TSPAN4-212ENST00000494815 SPTBN1Q01082 2364 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-212ENST00000494815 DFFBO76075 338 aa15.27■□□□□ 0.04
TSPAN4-212ENST00000494815 IGKV1-39P01597 117 aa15.27■□□□□ 0.04
TSPAN4-212ENST00000494815 IGKV1D-39P04432 117 aa15.27■□□□□ 0.04
TSPAN4-212ENST00000494815 KAAG1Q9UBP8 84 aa15.27■□□□□ 0.04
TSPAN4-212ENST00000494815 PAX9P55771 341 aa15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 CLDN34H7C241 214 aa15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 FSTL3O95633 263 aa15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 GPR12P47775 334 aa15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 RAB7AP51149 207 aa15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 GAMTQ14353 236 aa15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 RCC1LQ96I51 464 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 GNG13Q9P2W3 67 aa15.26■□□□□ 0.03
TSPAN4-212ENST00000494815 NXPH3O95157 252 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 CLDN1O95832 211 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 FABP4P15090 132 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 PKIAP61925 76 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 RAB11AP62491 216 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 RPL30P62888 115 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 GPR146Q96CH1 333 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 SMG1Q96Q15 3661 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 A0A087X0M5 115 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 A0A0G2JRQ6 117 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 A0A1B0GX30 115 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 NDUFB3O43676 98 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 IFNA5P01569 189 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 LRRC10Q5BKY1 277 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 USF3Q68DE3 2245 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 THNSL2Q86YJ6 484 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 IFI27L2Q9H2X8 130 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 CBLN4Q9NTU7 201 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 IDI2-AS1Q9NZ38 188 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 GAB2Q9UQC2 676 aa15.25■□□□□ 0.03
TSPAN4-212ENST00000494815 PHOX2AO14813 284 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 IGKV1-5P01602 117 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 BCL2P10415 239 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 RPL31P62899 125 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 OR10A7Q8NGE5 316 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 GAL3ST2Q9H3Q3 398 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms