RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 EAF1Q96JC9 268 aaPredicted RBP12.73□□□□□ -0.37
SDF4-207ENST00000494748 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
SDF4-207ENST00000494748 CBY1Q9Y3M2 126 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 SAA2-SAA4A0A096LPE2 208 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 WNT9BO14905 357 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 CELA3BP08861 270 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 GCHFRP30047 84 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 PDLIM3Q53GG5 364 aaPredicted RBP12.73□□□□□ -0.37
SDF4-207ENST00000494748 C11orf53Q8IXP5 236 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 C1orf174Q8IYL3 243 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 SEPSECSQ9HD40 501 aaKnown RBP12.73□□□□□ -0.37
SDF4-207ENST00000494748 SLC45A2Q9UMX9 530 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 PRRC2CQ9Y520 2896 aaKnown RBP12.73□□□□□ -0.37
SDF4-207ENST00000494748 LY96Q9Y6Y9 160 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 TRGV10A0A0A0MS01 117 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 FCN1O00602 326 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 FOXH1O75593 365 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 SP1P08047 785 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 RAB7AP51149 207 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 FOXF2Q12947 444 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 OR1C1Q15619 314 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 BATFQ16520 125 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 BCL2L2Q92843 193 aaPredicted RBP12.72□□□□□ -0.37
SDF4-207ENST00000494748 GNB1LQ9BYB4 327 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 MSL2Q9HCI7 577 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 SNURFLB1AK76 121 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 SSTR5P35346 364 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 TGFBR3Q03167 851 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 MMDQ15546 238 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 DCAF12Q5T6F0 453 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 MMD2Q8IY49 270 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 STPG4Q8N801 248 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 SMPD2O60906 423 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 COL5A1-AS1Q5SY13 56 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 BAGE3Q86Y29 109 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 BAGE2Q86Y30 109 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 OR4B1Q8NGF8 309 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 MRGPRDQ8TDS7 321 aa12.72□□□□□ -0.37
SDF4-207ENST00000494748 GFRA3O60609 400 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 TDGF1P13385 188 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 VASH2Q86V25 355 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 RNF2Q99496 336 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 TBL2Q9Y4P3 447 aaKnown RBP12.71□□□□□ -0.37
SDF4-207ENST00000494748 ICE1Q9Y2F5 2266 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 TRA2AQ13595 282 aaKnown RBP eCLIP12.71□□□□□ -0.37
SDF4-207ENST00000494748 EFNB3Q15768 340 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 C3AR1Q16581 482 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
SDF4-207ENST00000494748 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
SDF4-207ENST00000494748 BOKQ9UMX3 212 aaPredicted RBP12.71□□□□□ -0.37
SDF4-207ENST00000494748 MRPS17Q9Y2R5 130 aaKnown RBP12.71□□□□□ -0.37
SDF4-207ENST00000494748 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.38
SDF4-207ENST00000494748 A0A1W2PS18 150 aa12.71□□□□□ -0.38
SDF4-207ENST00000494748 RBMXL2O75526 392 aaKnown RBP12.71□□□□□ -0.38
SDF4-207ENST00000494748 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.38
SDF4-207ENST00000494748 CHRNB4P30926 498 aa12.71□□□□□ -0.38
SDF4-207ENST00000494748 HSD17B10Q99714 261 aaKnown RBP12.71□□□□□ -0.38
SDF4-207ENST00000494748 METRNQ9UJH8 293 aa12.71□□□□□ -0.38
SDF4-207ENST00000494748 LOXL2Q9Y4K0 774 aa12.71□□□□□ -0.38
SDF4-207ENST00000494748 TRBV9A0A0B4J1U6 114 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 OR13A1Q8NGR1 328 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 DNAJC4Q9NNZ3 241 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 NRN1Q9NPD7 142 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 TRAV3A0A0B4J244 114 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 SIAH2O43255 324 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 HYPMO75409 117 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 MMP23AO75900 390 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 IGLC2P0DOY2 106 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 IGLC3P0DOY3 106 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 MAGEA5P43359 124 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 ZNF83P51522 516 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 NIT1Q86X76 327 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 OR8I2Q8N0Y5 310 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 SAMD10Q9BYL1 202 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 C15orf65H3BRN8 121 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 OR10J4P0C629 311 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 DUTP33316 252 aaKnown RBP12.7□□□□□ -0.38
SDF4-207ENST00000494748 LYSMD4Q5XG99 296 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 ZNF826PQ6ZT77 177 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 C11orf42Q8N5U0 333 aa12.7□□□□□ -0.38
SDF4-207ENST00000494748 FAM103A1Q9BTL3 118 aaKnown RBP12.7□□□□□ -0.38
SDF4-207ENST00000494748 FAM90A9PA6NNJ1 464 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 GRPP07492 148 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 AREGP15514 252 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 KRTDAPP60985 99 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 CX3CL1P78423 397 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 SPATA45Q537H7 98 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 TPRX1Q8N7U7 411 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 SSMEM1Q8WWF3 244 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 PSG11Q9UQ72 335 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 ZNF318Q5VUA4 2279 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 DEFB108AA8MXU0 73 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 OR10J3Q5JRS4 329 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 ABHD12Q8N2K0 398 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 SIGLECL1Q8N7X8 197 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 KCNS1Q96KK3 526 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 FAM173AQ9BQD7 235 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms