RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FYTTD1Q96QD9 318 aaKnown RBP25.5■■□□□ 1.67
CBX4-203ENST00000494546 PEF1Q9UBV8 284 aaKnown RBP25.5■■□□□ 1.67
CBX4-203ENST00000494546 HMX3A6NHT5 357 aa25.49■■□□□ 1.67
CBX4-203ENST00000494546 HPGDSO60760 199 aa25.49■■□□□ 1.67
CBX4-203ENST00000494546 RPL27AP46776 148 aaKnown RBP25.49■■□□□ 1.67
CBX4-203ENST00000494546 AADACL3Q5VUY0 350 aa25.49■■□□□ 1.67
CBX4-203ENST00000494546 DHRS11Q6UWP2 260 aa25.49■■□□□ 1.67
CBX4-203ENST00000494546 ANKRD13BQ86YJ7 626 aa25.49■■□□□ 1.67
CBX4-203ENST00000494546 TTC9CQ8N5M4 171 aa25.49■■□□□ 1.67
CBX4-203ENST00000494546 ELOVL1Q9BW60 279 aa25.49■■□□□ 1.67
CBX4-203ENST00000494546 GABARAPO95166 117 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 ELK1P19419 428 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 MAS1LP35410 378 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 ZNF45Q02386 682 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 C11orf87Q6NUJ2 197 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 SNX29P2Q8IUI4 249 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 OR6Q1Q8NGQ2 317 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 BORCS5Q969J3 196 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 AKIP1Q9NQ31 210 aa25.48■■□□□ 1.67
CBX4-203ENST00000494546 RBFOX2O43251 390 aaKnown RBP eCLIP25.47■■□□□ 1.672e-8■■■■■ 27
CBX4-203ENST00000494546 TRBV12-3P01733 135 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 HLA-DMAP28067 261 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 GNRHRP30968 328 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 CTF1Q16619 201 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 GPR107Q5VW38 600 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 OR4A47Q6IF82 309 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 SLC25A42Q86VD7 318 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 GPX8Q8TED1 209 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 MOB3AQ96BX8 217 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 AIFM2Q9BRQ8 373 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 RSRP1Q9BUV0 290 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 HRASLSQ9HDD0 168 aa25.47■■□□□ 1.67
CBX4-203ENST00000494546 DPPA5A6NC42 116 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 FAM223BA6NKX1 122 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 TEX22C9J3V5 150 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 HPRT1P00492 218 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 IL6RP08887 468 aaPredicted RBP25.46■■□□□ 1.67
CBX4-203ENST00000494546 SPNP16150 400 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 HRH1P35367 487 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 RPL8P62917 257 aaKnown RBP25.46■■□□□ 1.67
CBX4-203ENST00000494546 ATP5G2Q06055 141 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 LYSMD2Q8IV50 215 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 FAM223AQ8IWN6 122 aa25.46■■□□□ 1.67
CBX4-203ENST00000494546 E7EUB6 86 aa25.45■■□□□ 1.66
CBX4-203ENST00000494546 KLF5Q13887 457 aaPredicted RBP25.45■■□□□ 1.66
CBX4-203ENST00000494546 MZT2AQ6P582 158 aa25.45■■□□□ 1.66
CBX4-203ENST00000494546 MRPS26Q9BYN8 205 aaKnown RBP25.45■■□□□ 1.66
CBX4-203ENST00000494546 SCPEP1Q9HB40 452 aa25.45■■□□□ 1.66
CBX4-203ENST00000494546 BET1LQ9NYM9 111 aa25.45■■□□□ 1.66
CBX4-203ENST00000494546 TRBV9A0A0B4J1U6 114 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 FAM25AB3EWG3 89 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 FAM25CB3EWG5 89 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 FAM25GB3EWG6 89 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 SYNJ2BPP57105 145 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 TAS2R31P59538 309 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 EXOSC2Q13868 293 aaKnown RBP25.44■■□□□ 1.66
CBX4-203ENST00000494546 HAPLN4Q86UW8 402 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 OR6F1Q8NGZ6 308 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 OR4A5Q8NH83 315 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 ZNF257Q9Y2Q1 563 aa25.44■■□□□ 1.66
CBX4-203ENST00000494546 A0A1B0GW64 132 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 OR2J3O76001 311 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 RLN1P04808 185 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 ZNF735P0CB33 412 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 MYOD1P15172 320 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 NQO2P16083 231 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 HLA-GP17693 338 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 VAX1Q5SQQ9 334 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 NECAP1Q8NC96 275 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 CD300LFQ8TDQ1 290 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 AP3S1Q92572 193 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 FXYD6Q9H0Q3 95 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 SLC2A9Q9NRM0 540 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 ADAM30Q9UKF2 790 aa25.43■■□□□ 1.66
CBX4-203ENST00000494546 S1PR2O95136 353 aa25.42■■□□□ 1.66
CBX4-203ENST00000494546 RPEL1Q2QD12 228 aa25.42■■□□□ 1.66
CBX4-203ENST00000494546 C19orf35Q6ZS72 473 aa25.42■■□□□ 1.66
CBX4-203ENST00000494546 DMBX1Q8NFW5 382 aa25.42■■□□□ 1.66
CBX4-203ENST00000494546 PLEKHA2Q9HB19 425 aa25.42■■□□□ 1.66
CBX4-203ENST00000494546 NPIPB5A8MRT5 1133 aa25.41■■□□□ 1.66
CBX4-203ENST00000494546 PGLYRP1O75594 196 aaPredicted RBP25.41■■□□□ 1.66
CBX4-203ENST00000494546 GP9P14770 177 aa25.41■■□□□ 1.66
CBX4-203ENST00000494546 ZNF182P17025 639 aaPredicted RBP25.41■■□□□ 1.66
CBX4-203ENST00000494546 TSPAN5P62079 268 aa25.41■■□□□ 1.66
CBX4-203ENST00000494546 OR9G4Q8NGQ1 327 aa25.41■■□□□ 1.66
CBX4-203ENST00000494546 AREGP15514 252 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 RPA2P15927 270 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 RCVRNP35243 200 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 POU2AF1Q16633 256 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 C15orf32Q32M92 178 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 GPR141Q7Z602 305 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 CMTM1Q8IZ96 169 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 TMEM140Q9NV12 185 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 SMAD5-AS1Q9Y6J3 95 aa25.4■■□□□ 1.66
CBX4-203ENST00000494546 TRAV3A0A0B4J244 114 aa25.39■■□□□ 1.66
CBX4-203ENST00000494546 UPK2O00526 184 aa25.39■■□□□ 1.66
CBX4-203ENST00000494546 TATDN3Q17R31 274 aa25.39■■□□□ 1.66
CBX4-203ENST00000494546 COMMD9Q9P000 198 aa25.39■■□□□ 1.66
CBX4-203ENST00000494546 GPR31O00270 319 aa25.38■■□□□ 1.65
CBX4-203ENST00000494546 PSMB6P28072 239 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms