RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 RPUSD1Q9UJJ7 312 aaKnown RBP7.95□□□□□ -1.14
NPHP3-209ENST00000493732 URGCP-MRPS24S4R325 110 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 C17orf100A8MU93 164 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 CXorf1O96002 111 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 CXCL1P09341 107 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 CD99P14209 185 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 NPY1RP25929 384 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 CDX1P47902 265 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-209ENST00000493732 LINC00205P59089 165 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 TLE1Q04724 770 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 SPINK9Q5DT21 86 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 OR4A47Q6IF82 309 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 TEPPQ6URK8 271 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 TREML4Q6UXN2 200 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 SLC25A48Q6ZT89 311 aaKnown RBP7.95□□□□□ -1.14
NPHP3-209ENST00000493732 ASCL5Q7RTU5 278 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 DOLPP1Q86YN1 238 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 TGIF2LYQ8IUE0 185 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 ARL6IP6Q8N6S5 226 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 LINC00469Q8N7U9 141 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 SLC24A4Q8NFF2 622 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 PARLQ9H300 379 aa7.95□□□□□ -1.14
NPHP3-209ENST00000493732 EP300Q09472 2414 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-209ENST00000493732 TGIF2-C20orf24A0A0A6YYL0 155 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 A0A1W2PPE3 182 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 C11orf94C9JXX5 98 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 PRSS46E5RG02 174 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 H7BYZ3 331 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 PPP1R2P9O14990 202 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 PAGE4O60829 102 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 S100A2P29034 98 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 RBPJQ06330 500 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 SPRNQ5BIV9 151 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 ZNF343Q6P1L6 599 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 PRSS33Q8NF86 280 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 OSR1Q8TAX0 266 aaPredicted RBP7.94□□□□□ -1.14
NPHP3-209ENST00000493732 RPUSD4Q96CM3 377 aaKnown RBP7.94□□□□□ -1.14
NPHP3-209ENST00000493732 PLPPR2Q96GM1 343 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 CCL13Q99616 98 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 SSX3Q99909 188 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 CHODLQ9H9P2 273 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 DOK5Q9P104 306 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 PXMP4Q9Y6I8 212 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 TTC28Q96AY4 2481 aa7.94□□□□□ -1.14
NPHP3-209ENST00000493732 A0A0G2JNJ9 132 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 RRHO14718 337 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 SLC31A2O15432 143 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 APOA2P02652 100 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 GYPAP02724 150 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 OR4A8P0C604 315 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 RPL29P47914 159 aaKnown RBP7.93□□□□□ -1.14
NPHP3-209ENST00000493732 TDGF1P3P51864 188 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 RHOBP62745 196 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 RPL23P62829 140 aaKnown RBP7.93□□□□□ -1.14
NPHP3-209ENST00000493732 FAM71F2Q6NXP2 309 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 KCNIP4Q6PIL6 250 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 Q8N7P7 452 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 C8orf31Q8N9H6 132 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 ZNF383Q8NA42 475 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 DEFB108BQ8NET1 73 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 OR5B3Q8NH48 314 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PYGO2Q9BRQ0 406 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 C19orf24Q9BVV8 132 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 GGTLC1Q9BX51 225 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 SRD5A3Q9H8P0 318 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PLEKHA3Q9HB20 300 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 SLC35D1Q9NTN3 355 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 BET1LQ9NYM9 111 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 JKAMPQ9P055 326 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 Q9UFV3 132 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 LSM4Q9Y4Z0 139 aaKnown RBP7.93□□□□□ -1.14
NPHP3-209ENST00000493732 OR51B2Q9Y5P1 312 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PPIAL4EA0A075B759 164 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PPIAL4DF5H284 164 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 TMPRSS2O15393 492 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 CLN5O75503 358 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 IL6RP08887 468 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-209ENST00000493732 STAG3L2P0CL84 134 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 STAG3L3P0CL85 134 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PPIAL4FP0DN26 164 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 SRP14P37108 136 aaKnown RBP7.93□□□□□ -1.14
NPHP3-209ENST00000493732 NDUFA6P56556 154 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PRCDQ00LT1 54 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 ADIPOQQ15848 244 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 GFRALQ6UXV0 394 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 WFDC8Q8IUA0 241 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 VKORC1L1Q8N0U8 176 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 ABHD12Q8N2K0 398 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 ABHD17AQ96GS6 310 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 MS4A5Q9H3V2 200 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 GAR1Q9NY12 217 aaKnown RBP7.93□□□□□ -1.14
NPHP3-209ENST00000493732 SLC25A10Q9UBX3 287 aaPredicted RBP7.93□□□□□ -1.14
NPHP3-209ENST00000493732 TP53TG5Q9Y2B4 290 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 ZNF835Q9Y2P0 537 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PPIAL4AQ9Y536 164 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 ARL2-SNX15V9GYD0 113 aa7.93□□□□□ -1.14
NPHP3-209ENST00000493732 PPP5D1E7EU14 171 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 J3QR06 171 aa7.92□□□□□ -1.14
NPHP3-209ENST00000493732 K7EM74 188 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms