RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 TNFAIP8O95379 198 aa16.79■□□□□ 0.28
HLA-E-203ENST00000493699 MAS1LP35410 378 aa16.79■□□□□ 0.28
HLA-E-203ENST00000493699 LSM3P62310 102 aaKnown RBP16.79■□□□□ 0.28
HLA-E-203ENST00000493699 SIGLEC8Q9NYZ4 499 aa16.79■□□□□ 0.28
HLA-E-203ENST00000493699 MEIS3P1A6NDR6 274 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 HRASP01112 189 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 CSN3P07498 182 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 FRMD6-AS1P0C7T7 363 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 ZNF735P0CB33 412 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 KIR2DS2P43631 304 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 ATP5G2Q06055 141 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 UBE2NLQ5JXB2 153 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 SLC25A42Q86VD7 318 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 NECAP1Q8NC96 275 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 SLC5A7Q9GZV3 580 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 SLC2A9Q9NRM0 540 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 ANAPC10Q9UM13 185 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 ZNF257Q9Y2Q1 563 aa16.78■□□□□ 0.28
HLA-E-203ENST00000493699 NPIPB5A8MRT5 1133 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 BMPR1BO00238 502 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 RBFOX2O43251 390 aaKnown RBP eCLIP16.77■□□□□ 0.286e-7■■□□□ 13.3
HLA-E-203ENST00000493699 RPL27AP46776 148 aaKnown RBP16.77■□□□□ 0.28
HLA-E-203ENST00000493699 TATDN3Q17R31 274 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 RPEL1Q2QD12 228 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 DHRS11Q6UWP2 260 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 ZNF818PQ6ZRF7 136 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 SPAG16Q8N0X2 631 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 VCX3AQ9NNX9 186 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 DMRT1Q9Y5R6 373 aa16.77■□□□□ 0.28
HLA-E-203ENST00000493699 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.76■□□□□ 0.27
HLA-E-203ENST00000493699 CRYGCP07315 174 aa16.76■□□□□ 0.27
HLA-E-203ENST00000493699 EXOSC2Q13868 293 aaKnown RBP16.76■□□□□ 0.27
HLA-E-203ENST00000493699 KLK9Q2XQG4 91 aa16.76■□□□□ 0.27
HLA-E-203ENST00000493699 SSX9Q7RTT3 188 aa16.76■□□□□ 0.27
HLA-E-203ENST00000493699 SAMD12Q8N8I0 201 aa16.76■□□□□ 0.27
HLA-E-203ENST00000493699 SLC25A46Q96AG3 418 aa16.76■□□□□ 0.27
HLA-E-203ENST00000493699 BET1LQ9NYM9 111 aa16.76■□□□□ 0.27
HLA-E-203ENST00000493699 KLK9Q9UKQ9 250 aa16.76■□□□□ 0.27
HLA-E-203ENST00000493699 CGB1A6NKQ9 187 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 SULT1C2O00338 296 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 OR2J3O76001 311 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 NAT1P18440 290 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 GNRHRP30968 328 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 MECP2P51608 486 aaKnown RBP16.75■□□□□ 0.27
HLA-E-203ENST00000493699 TAS2R20P59543 309 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 FXYD4P59646 89 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 RPL8P62917 257 aaKnown RBP16.75■□□□□ 0.27
HLA-E-203ENST00000493699 POU2AF1Q16633 256 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 C15orf32Q32M92 178 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 OR4A47Q6IF82 309 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 C19orf35Q6ZS72 473 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 FANCD2OSQ96PS1 177 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 FYTTD1Q96QD9 318 aaKnown RBP16.75■□□□□ 0.27
HLA-E-203ENST00000493699 AIFM2Q9BRQ8 373 aa16.75■□□□□ 0.27
HLA-E-203ENST00000493699 A8MZ25 164 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 HPRT1P00492 218 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 MYOD1P15172 320 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 RFX2P48378 723 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 TAS2R31P59538 309 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 TMEM69Q5SWH9 247 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 OR4A5Q8NH83 315 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 KCTD12Q96CX2 325 aaKnown RBP16.74■□□□□ 0.27
HLA-E-203ENST00000493699 THAP7Q9BT49 309 aaPredicted RBP16.74■□□□□ 0.27
HLA-E-203ENST00000493699 IFT46Q9NQC8 304 aa16.74■□□□□ 0.27
HLA-E-203ENST00000493699 H0Y980 276 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 IGHV4-30-4P0DP06 118 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 AREGP15514 252 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 CTRB1P17538 263 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 HLA-GP17693 338 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 PSMB6P28072 239 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 CATR1Q13166 79 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 CTRB2Q6GPI1 263 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 ADAMTSL5Q6ZMM2 481 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 TMEM17Q86X19 198 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 FUNDC2Q9BWH2 189 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 C19orf73Q9NVV2 129 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 EHFQ9NZC4 300 aa16.73■□□□□ 0.27
HLA-E-203ENST00000493699 NQO2P16083 231 aa16.72■□□□□ 0.27
HLA-E-203ENST00000493699 FAM209BQ5JX69 171 aa16.72■□□□□ 0.27
HLA-E-203ENST00000493699 PLEKHA2Q9HB19 425 aa16.72■□□□□ 0.27
HLA-E-203ENST00000493699 PEMTQ9UBM1 199 aa16.72■□□□□ 0.27
HLA-E-203ENST00000493699 FBXL7Q9UJT9 491 aa16.72■□□□□ 0.27
HLA-E-203ENST00000493699 DNAH7Q8WXX0 4024 aa16.72■□□□□ 0.27
HLA-E-203ENST00000493699 TRAV3A0A0B4J244 114 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 DPPA5A6NC42 116 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 NDUFB8O95169 186 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 EIF4EP06730 217 aaKnown RBP16.71■□□□□ 0.27
HLA-E-203ENST00000493699 PRSS3P35030 304 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 HERV-K104P61576 105 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 NCS1P62166 190 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 LYSMD2Q8IV50 215 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 OR51H1Q8NH63 302 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 CD300LFQ8TDQ1 290 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 MOB3AQ96BX8 217 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 RCHY1Q96PM5 261 aa16.71■□□□□ 0.27
HLA-E-203ENST00000493699 ZNF2Q9BSG1 426 aaPredicted RBP16.71■□□□□ 0.27
HLA-E-203ENST00000493699 IZUMO1RA6ND01 250 aa16.7■□□□□ 0.26
HLA-E-203ENST00000493699 PPP5D1E7EU14 171 aa16.7■□□□□ 0.26
HLA-E-203ENST00000493699 UPK2O00526 184 aa16.7■□□□□ 0.26
HLA-E-203ENST00000493699 PMP2P02689 132 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms