RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 C8orf4Q9NR00 106 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 DKKL1Q9UK85 242 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 PRELID1Q9Y255 219 aa0.98□□□□□ -2.25
SMC4-223ENST00000493695 SCAF11Q99590 1463 aaKnown RBP0.98□□□□□ -2.25
SMC4-223ENST00000493695 MAP3K5Q99683 1374 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 KIAA2026Q5HYC2 2103 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 FLG2Q5D862 2391 aaPredicted RBP0.97□□□□□ -2.25
SMC4-223ENST00000493695 TRAV7A0A075B6U4 112 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 A0A0A6YYH2 397 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 A6NJ64 397 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 LST1O00453 97 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 CXCR6O00574 342 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 PLA2G10O15496 165 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 KLRC4O43908 158 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 ANGP03950 147 aaKnown RBP0.97□□□□□ -2.25
SMC4-223ENST00000493695 TYMSP04818 313 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 GPX2P18283 190 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 RPL28P46779 137 aaKnown RBP0.97□□□□□ -2.25
SMC4-223ENST00000493695 MAP3K7CLP57077 242 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 AKR1C1Q04828 323 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 TNFAIP8L3Q5GJ75 292 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 C5orf46Q6UWT4 87 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 ZNF550Q7Z398 422 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 KTN1-AS1Q86SY8 53 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 SLC22A24Q8N4F4 322 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 RNF133Q8WVZ7 376 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 IMMP2LQ96T52 175 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 LLPHQ9BRT6 129 aaKnown RBP0.97□□□□□ -2.25
SMC4-223ENST00000493695 DOHHQ9BU89 302 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 AK3Q9UIJ7 227 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 CCDC88CQ9P219 2028 aa0.97□□□□□ -2.25
SMC4-223ENST00000493695 SDK1Q7Z5N4 2213 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 PTPRBP23467 1997 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 IGHV1-69-2A0A0G2JMI3 117 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 F8W036 122 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 H7C2G1 150 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 SSNA1O43805 119 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 NSA2O95478 260 aaKnown RBP0.96□□□□□ -2.26
SMC4-223ENST00000493695 RPL12P30050 165 aaKnown RBP0.96□□□□□ -2.26
SMC4-223ENST00000493695 MAGEA12P43365 314 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 SLCO1A2P46721 670 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 AP1S1P61966 158 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 TMEM155Q4W5P6 130 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 FAM151BQ6UXP7 276 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 C9orf163Q8N9P6 203 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 Q96M85 177 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 GPR84Q9NQS5 396 aa0.96□□□□□ -2.26
SMC4-223ENST00000493695 MEIKINA0A087WXM9 373 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 A0A0D9SEW6 157 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 OR51F1A6NGY5 319 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 OR4C45A6NMZ5 311 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 CETN3O15182 167 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 PFDN6O15212 129 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 TFPTP0C1Z6 253 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 LYNX1P0DP58 116 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 RAB14P61106 215 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 POLR2GP62487 172 aaKnown RBP eCLIP0.95□□□□□ -2.26
SMC4-223ENST00000493695 DMTNQ08495 405 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 LRRN1Q6UXK5 716 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 UNQ6190/PRO20217Q6UXQ8 127 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 RPP25LQ8N5L8 163 aaKnown RBP0.95□□□□□ -2.26
SMC4-223ENST00000493695 CHST6Q9GZX3 395 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 OR51I2Q9H344 312 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 C15orf41Q9Y2V0 281 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 TIMM9Q9Y5J7 89 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 STRCQ7RTU9 1775 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 FLT4P35916 1363 aa0.95□□□□□ -2.26
SMC4-223ENST00000493695 TRAV38-1A0A0B4J264 116 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 TRBV6-5A0A0K0K1A5 114 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 HMSDA8MTL9 139 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 C21orf140B9A014 251 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 H3BT86 120 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 MRPS14O60783 128 aaKnown RBP0.94□□□□□ -2.26
SMC4-223ENST00000493695 OCM2P0CE71 109 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 AKR1C3P42330 323 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 AQP4P55087 323 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 HIST1H4AP62805 103 aaKnown RBP0.94□□□□□ -2.26
SMC4-223ENST00000493695 EMX1Q04741 257 aaPredicted RBP0.94□□□□□ -2.26
SMC4-223ENST00000493695 Q1T7F1 81 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 SSX8Q7RTT4 187 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 DEFB125Q8N687 156 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 PIGXQ8TBF5 258 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 OR8D2Q9GZM6 311 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 RSL24D1Q9UHA3 163 aaKnown RBP0.94□□□□□ -2.26
SMC4-223ENST00000493695 C3orf18Q9UK00 162 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 ATP6V1DQ9Y5K8 247 aa0.94□□□□□ -2.26
SMC4-223ENST00000493695 TRAPPC13A5PLN9 417 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 TRAPPC2LH3BP13 241 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 SLC16A4O15374 487 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 CREBL2O60519 120 aaPredicted RBP0.93□□□□□ -2.26
SMC4-223ENST00000493695 MSMBP08118 114 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 DEFA4P12838 97 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 MYL12AP19105 171 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 MAGEA2P43356 314 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 EVX1P49640 407 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 RPL30P62888 115 aaKnown RBP0.93□□□□□ -2.26
SMC4-223ENST00000493695 NNATQ16517 81 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 MOGQ16653 247 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 SFXN4Q6P4A7 337 aa0.93□□□□□ -2.26
SMC4-223ENST00000493695 ZNF705AQ6ZN79 300 aaPredicted RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms