RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 NDUFB8O95169 186 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 CD36P16671 472 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 CRHBPP24387 322 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 ARL3P36405 182 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 RPL27AP46776 148 aaKnown RBP13.03□□□□□ -0.32
COL9A1-210ENST00000493682 CLEC19AQ6UXS0 136 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 FANCD2OSQ96PS1 177 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 OR2A7Q96R45 310 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 ST6GALNAC5Q9BVH7 336 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 ATG5Q9H1Y0 275 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 SLC2A9Q9NRM0 540 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 S4R3C0 116 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 IGKV1D-13A0A0B4J2D9 117 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 TMEM213A2RRL7 107 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 DPPA5A6NC42 116 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 SLC22A5O76082 557 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 CTXN2P0C2S0 81 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 ZNF735P0CB33 412 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 IGKV1-13P0DP09 117 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 AREGP15514 252 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 RAB3BP20337 219 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 MYL9P24844 172 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 ARL6IP1Q15041 203 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 CDNFQ49AH0 187 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
COL9A1-210ENST00000493682 PUSL1Q8N0Z8 303 aaKnown RBP13.02□□□□□ -0.33
COL9A1-210ENST00000493682 OR4S2Q8NH73 311 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 TMEM167AQ8TBQ9 72 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 FYTTD1Q96QD9 318 aaKnown RBP13.02□□□□□ -0.33
COL9A1-210ENST00000493682 MLXQ9UH92 298 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 ALMS1Q8TCU4 4167 aa13.02□□□□□ -0.33
COL9A1-210ENST00000493682 ZNF320A2RRD8 509 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 CRYGCP07315 174 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 PSMB6P28072 239 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 MAS1LP35410 378 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 BRWD1-AS2P59051 145 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 EIF4EBP1Q13541 118 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-210ENST00000493682 FAM106AQ4KMX7 169 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 NR2C2APQ86WQ0 139 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 UXS1Q8NBZ7 420 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 OR52B4Q8NGK2 314 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 TCTEX1D2Q8WW35 142 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 NRG4Q8WWG1 115 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 HSD17B10Q99714 261 aaKnown RBP13.01□□□□□ -0.33
COL9A1-210ENST00000493682 OVOL2Q9BRP0 275 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 GGTLC1Q9BX51 225 aa13.01□□□□□ -0.33
COL9A1-210ENST00000493682 PLECQ15149 4684 aaKnown RBP13.01□□□□□ -0.33
COL9A1-210ENST00000493682 A8MWP6 167 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 SCAF4O95104 1147 aaKnown RBP13□□□□□ -0.33
COL9A1-210ENST00000493682 TBCEQ15813 527 aaPredicted RBP13□□□□□ -0.33
COL9A1-210ENST00000493682 KLK9Q2XQG4 91 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 HACD4Q5VWC8 232 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 ZNF367Q7RTV3 350 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 EEF1AKMT3Q96AZ1 226 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 DCSTAMPQ9H295 470 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 NDUFB11Q9NX14 153 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 KLK9Q9UKQ9 250 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 SPATA2Q9UM82 520 aa13□□□□□ -0.33
COL9A1-210ENST00000493682 TRDV1A0A1B0GX56 115 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 DHFRP00374 187 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 CTRB1P17538 263 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 CTRB2Q6GPI1 263 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 CNIH2Q6PI25 160 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 MFSD4AQ8N468 514 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 NUDCD2Q8WVJ2 157 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 LINC00476Q8WZB0 136 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 TAS2R8Q9NYW2 309 aa12.99□□□□□ -0.33
COL9A1-210ENST00000493682 LOC102724200A0A096LPH7 203 aaPredicted RBP12.98□□□□□ -0.33
COL9A1-210ENST00000493682 SMIM30A4D0T7 59 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 ANKRD65E5RJM6 399 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 REG1AP05451 166 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 MYOD1P15172 320 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 HIST1H1BP16401 226 aaKnown RBP12.98□□□□□ -0.33
COL9A1-210ENST00000493682 ANKRD55Q3KP44 614 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 C22orf42Q6IC83 251 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 OR4A47Q6IF82 309 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 BTNL8Q6UX41 500 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 SSX9Q7RTT3 188 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 GPHA2Q96T91 129 aa12.98□□□□□ -0.33
COL9A1-210ENST00000493682 IGLV11-55A0A075B6I3 123 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 TRBV7-1A0A0A6YYK4 115 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 TMEM235A6NFC5 223 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 MFSD2BA6NFX1 497 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 CGB1A6NKQ9 187 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 HRASP01112 189 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 CLEC3BP05452 202 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 DEFA4P12838 97 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 HLA-GP17693 338 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 RPL8P62917 257 aaKnown RBP12.97□□□□□ -0.33
COL9A1-210ENST00000493682 TM4SF20Q53R12 229 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 UNQ9165/PRO28630Q6UXU0 137 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 ZNF66Q6ZN08 573 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
COL9A1-210ENST00000493682 CXorf65A6NEN9 183 aa12.96□□□□□ -0.33
COL9A1-210ENST00000493682 SSX5O60225 188 aa12.96□□□□□ -0.33
COL9A1-210ENST00000493682 GALP22466 123 aa12.96□□□□□ -0.33
COL9A1-210ENST00000493682 CXorf58Q96LI9 332 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms