RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SHOXO15266 292 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 ST8SIA3O43173 380 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 DEDDO75618 318 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 SPDEFO95238 335 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 SAA1P0DJI8 122 aaPredicted RBP10.15□□□□□ -0.78
VPS52-220ENST00000493674 NKX2-1P43699 371 aaPredicted RBP10.15□□□□□ -0.78
VPS52-220ENST00000493674 DYNLT3P51808 116 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 BPIFB3P59826 476 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 UBE2KP61086 200 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 MRGPRG-AS1Q2M3A8 158 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 FBLN7Q53RD9 439 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 CXorf66Q5JRM2 361 aaPredicted RBP10.15□□□□□ -0.78
VPS52-220ENST00000493674 LAMTOR1Q6IAA8 161 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 C11orf87Q6NUJ2 197 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 ZNF429Q86V71 674 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 OR1S1Q8NH92 325 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 RITA1Q96K30 269 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 MEGF9Q9H1U4 602 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.15□□□□□ -0.78
VPS52-220ENST00000493674 TMEM14BQ9NUH8 114 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 OR5AC2Q9NZP5 309 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 MBD2Q9UBB5 411 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 HSPB7Q9UBY9 170 aa10.15□□□□□ -0.78
VPS52-220ENST00000493674 ANK3Q12955 4377 aaKnown RBP10.14□□□□□ -0.79
VPS52-220ENST00000493674 TRAV3A0A0B4J244 114 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 UPK2O00526 184 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 KBTBD11O94819 623 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 NDUFA3O95167 84 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 PET100P0DJ07 73 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 PAX6P26367 422 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 EIF2B2P49770 351 aaKnown RBP10.14□□□□□ -0.79
VPS52-220ENST00000493674 NKX2-5P52952 324 aaPredicted RBP10.14□□□□□ -0.79
VPS52-220ENST00000493674 TNFRSF9Q07011 255 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 LRRC37A5PQ49AS3 106 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 BRD3OSQ6XYD6 125 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 C9orf139Q6ZV77 190 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 SSX9Q7RTT3 188 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 THNSL2Q86YJ6 484 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 C9orf62Q8N4C0 152 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 OR4A5Q8NH83 315 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 TMEM167AQ8TBQ9 72 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 TSNAXQ99598 290 aaKnown RBP10.14□□□□□ -0.79
VPS52-220ENST00000493674 TNFSF18Q9UNG2 199 aa10.14□□□□□ -0.79
VPS52-220ENST00000493674 FOXA2Q9Y261 457 aaPredicted RBP10.14□□□□□ -0.79
VPS52-220ENST00000493674 SVEP1Q4LDE5 3571 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 IGHV3OR16-10A0A075B7F0 116 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 A0A0U1RQK1 487 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 MOSP00540 346 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 SNRNP70P08621 437 aaKnown RBP10.13□□□□□ -0.79
VPS52-220ENST00000493674 RPS16P62249 146 aaKnown RBP10.13□□□□□ -0.79
VPS52-220ENST00000493674 PSG5Q15238 335 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 TEX45Q8NA69 505 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 NPBQ8NG41 125 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 OR2T10Q8NGZ9 312 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 VSTM2AQ8TAG5 236 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 THAP6Q8TBB0 222 aa10.13□□□□□ -0.79
VPS52-220ENST00000493674 EAF1Q96JC9 268 aaPredicted RBP10.13□□□□□ -0.79
VPS52-220ENST00000493674 SONP18583 2426 aaKnown RBP10.12□□□□□ -0.79
VPS52-220ENST00000493674 HIVEP2P31629 2446 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 FXYD6-FXYD2A0A087WZ82 144 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 RNF222A6NCQ9 220 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 CD5LO43866 347 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 TMEM50AO95807 157 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 SCGB1D2O95969 90 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 IGKV1D-33P01593 117 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 IGKV1-33P01594 117 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 CXCL2P19875 107 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 CNTFRP26992 372 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 PAX9P55771 341 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 OR2B8PP59922 312 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 S100A10P60903 97 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 POLR2GP62487 172 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS52-220ENST00000493674 ZNF345Q14585 488 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 AANATQ16613 207 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 VMA21Q3ZAQ7 101 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 OR4A16Q8NH70 328 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 GRPEL2Q8TAA5 225 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 PIFOQ8TCI5 191 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 QTRT1Q9BXR0 403 aaKnown RBP10.12□□□□□ -0.79
VPS52-220ENST00000493674 TPSG1Q9NRR2 321 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 PLSCR3Q9NRY6 295 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 CACFD1Q9UGQ2 172 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 PRNDQ9UKY0 176 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 NSG2Q9Y328 171 aa10.12□□□□□ -0.79
VPS52-220ENST00000493674 LSM5Q9Y4Y9 91 aaKnown RBP10.12□□□□□ -0.79
VPS52-220ENST00000493674 E5RGE8 158 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 RRHO14718 337 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 SYNGR2O43760 224 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 SLC25A17O43808 307 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 SNAPC5O75971 98 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 BRS3P32247 399 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 SPCS3P61009 180 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 SSBP2P81877 361 aaPredicted RBP10.11□□□□□ -0.79
VPS52-220ENST00000493674 LGALSLQ3ZCW2 172 aaPredicted RBP10.11□□□□□ -0.79
VPS52-220ENST00000493674 ZNF546Q86UE3 836 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 NANPQ8TBE9 248 aa10.11□□□□□ -0.79
VPS52-220ENST00000493674 AQP10Q96PS8 301 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms