RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 MAP1LC3BQ9GZQ8 125 aa10.64□□□□□ -0.71
PRAME-213ENST00000492657 HIPK2Q9H2X6 1198 aa10.64□□□□□ -0.71
PRAME-213ENST00000492657 TRAV3A0A0B4J244 114 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 CLDN34H7C241 214 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 CEACAM8P31997 349 aaPredicted RBP10.63□□□□□ -0.71
PRAME-213ENST00000492657 CFHR2P36980 270 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 TMEM41BQ5BJD5 291 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 C1orf174Q8IYL3 243 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 C1orf87Q8N0U7 546 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 TMEM37Q8WXS4 190 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 LHX4Q969G2 390 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 SNRNP40Q96DI7 357 aaKnown RBP10.63□□□□□ -0.71
PRAME-213ENST00000492657 SLC39A9Q9NUM3 307 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 AURKAIP1Q9NWT8 199 aaPredicted RBP10.63□□□□□ -0.71
PRAME-213ENST00000492657 TPRP12270 2363 aaKnown RBP10.63□□□□□ -0.71
PRAME-213ENST00000492657 RAI1Q7Z5J4 1906 aaPredicted RBP10.63□□□□□ -0.71
PRAME-213ENST00000492657 IGLV3-9A0A075B6K5 115 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 A8MXE2 369 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 B4DEV8 164 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 IFNA10P01566 189 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 SERF2P84101 59 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 ZCCHC24Q8N2G6 241 aaKnown RBP10.63□□□□□ -0.71
PRAME-213ENST00000492657 OR10G4Q8NGN3 311 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 FAM57AQ8TBR7 257 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 CALYQ9NYX4 217 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 PTPRQQ9UMZ3 2332 aa10.63□□□□□ -0.71
PRAME-213ENST00000492657 IGHV1-46P01743 117 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 CRYABP02511 175 aaKnown RBP10.62□□□□□ -0.71
PRAME-213ENST00000492657 FGF7P21781 194 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 CCKARP32238 428 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 PAX5Q02548 391 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 ADIRFQ15847 76 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 CISD2Q8N5K1 135 aaKnown RBP10.62□□□□□ -0.71
PRAME-213ENST00000492657 OR10P1Q8NGE3 313 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 IFI27L2Q9H2X8 130 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 SLC25A22Q9H936 323 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 SDF2L1Q9HCN8 221 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 GCM1Q9NP62 436 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 VAX2Q9UIW0 290 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 LAMP3Q9UQV4 416 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 TANC2Q9HCD6 1990 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 CD40P25942 277 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 NUTF2P61970 127 aaKnown RBP10.62□□□□□ -0.71
PRAME-213ENST00000492657 TNFAIP6P98066 277 aaPredicted RBP10.62□□□□□ -0.71
PRAME-213ENST00000492657 PNRC1Q12796 327 aaPredicted RBP10.62□□□□□ -0.71
PRAME-213ENST00000492657 C17orf58Q2M2W7 97 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 PPP1R35Q8TAP8 253 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 ABHD17AQ96GS6 310 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 CCL13Q99616 98 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 C2orf88Q9BSF0 95 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 JPT1Q9UK76 154 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 CGB3P0DN86 165 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 CGB7P0DN87 165 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 ZNF25P17030 456 aaPredicted RBP10.62□□□□□ -0.71
PRAME-213ENST00000492657 GNB2P62879 340 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 PMS2P11Q13670 270 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 TRAT1Q6PIZ9 186 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 MRGPRGQ86SM5 289 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 GATAD1Q8WUU5 269 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 TMEM147Q9BVK8 224 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 SFXN3Q9BWM7 321 aa10.62□□□□□ -0.71
PRAME-213ENST00000492657 TACC2O95359 2948 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 IGF2RP11717 2491 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 YPEL1O60688 119 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 GYPAP02724 150 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 CR1LQ2VPA4 569 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 CT45A1Q5HYN5 189 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 PRAMEF5Q5TYX0 476 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 DOLPP1Q86YN1 238 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 FAM216BQ8N7L0 139 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 CT45A3Q8NHU0 189 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 RPUSD4Q96CM3 377 aaKnown RBP10.61□□□□□ -0.71
PRAME-213ENST00000492657 TMEM68Q96MH6 324 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 RBM14Q96PK6 669 aaKnown RBP10.61□□□□□ -0.71
PRAME-213ENST00000492657 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 SMIM7Q9BQ49 75 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 A0A0G2JNJ9 132 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 A0A1W2PPQ1 181 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 F2RL2O00254 374 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 MMP23AO75900 390 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 WFDC8Q8IUA0 241 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 TCTEX1D1Q8N7M0 179 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 PINX1Q96BK5 328 aaKnown RBP10.61□□□□□ -0.71
PRAME-213ENST00000492657 PARD6GQ9BYG4 376 aaPredicted RBP10.61□□□□□ -0.71
PRAME-213ENST00000492657 OR6C3Q9NZP0 311 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 ZNRD1Q9P1U0 126 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 RNF7Q9UBF6 113 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 Q9UFV3 132 aa10.61□□□□□ -0.71
PRAME-213ENST00000492657 ELOA3CA0A087WX78 387 aaPredicted RBP10.6□□□□□ -0.71
PRAME-213ENST00000492657 IFNA1P01562 189 aa10.6□□□□□ -0.71
PRAME-213ENST00000492657 CCL8P80075 99 aa10.6□□□□□ -0.71
PRAME-213ENST00000492657 JOSD1Q15040 202 aaPredicted RBP10.6□□□□□ -0.71
PRAME-213ENST00000492657 FFAR4Q5NUL3 377 aa10.6□□□□□ -0.71
PRAME-213ENST00000492657 TP53TG5Q9Y2B4 290 aa10.6□□□□□ -0.71
PRAME-213ENST00000492657 LRBAP50851 2863 aa10.6□□□□□ -0.71
PRAME-213ENST00000492657 HPRT1P00492 218 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms