RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	OR4A4P	Q8NGN8	299 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	OR1L6	Q8NGR2	347 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	OR13C5	Q8NGS8	318 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	SNAPC3	Q92966	411 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	TMEM203	Q969S6	136 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	RAB3C	Q96E17	227 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	USMG5	Q96IX5	58 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	METTL1	Q9UBP6	276 aa	Known RBP	3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	HSF4	Q9ULV5	492 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602		V9GY05	133 aa		3.89	□□□□□ -1.79
SEC13-219	ENST00000492602	SAA2-SAA4	A0A096LPE2	208 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	TRBV6-6	A0A0A6YYG2	114 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	MPTX1	A8MV57	137 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602		H3BUA1	57 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	BET1	O15155	118 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	TUSC2	O75896	110 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	DIRAS3	O95661	229 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	SAA2	P0DJI9	122 aa	Predicted RBP	3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	CALR	P27797	417 aa	Known RBP	3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	S100G	P29377	79 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	VHL	P40337	213 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	RPS11	P62280	158 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	GNMT	Q14749	295 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	C2orf76	Q3KRA6	126 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	RNF212	Q495C1	297 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	C1orf100	Q5SVJ3	147 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	LIPK	Q5VXJ0	399 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF343	Q6P1L6	599 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	FAM131A	Q6UXB0	335 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF833P	Q6ZTB9	187 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	GAPT	Q8N292	157 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	SVOP	Q8N4V2	548 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	OR5T1	Q8NG75	326 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	OR5B3	Q8NH48	314 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	VSTM2A	Q8TAG5	236 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	MRPL30	Q8TCC3	161 aa	Known RBP	3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	APH1B	Q8WW43	257 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	CACNG8	Q8WXS5	425 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	BORCS5	Q969J3	196 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	FAM3D	Q96BQ1	224 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	ANAPC16	Q96DE5	110 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	GALNT14	Q96FL9	552 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	PGLYRP3	Q96LB9	341 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	CLCC1	Q96S66	551 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	SPIN2A	Q99865	258 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	SPIN2B	Q9BPZ2	258 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	TM2D1	Q9BX74	207 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	MRPL20	Q9BYC9	149 aa	Known RBP	3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	CSTL1	Q9H114	145 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	RNF167	Q9H6Y7	350 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	MRPS7	Q9Y2R9	242 aa	Known RBP	3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	FAT3	Q8TDW7	4589 aa		3.88	□□□□□ -1.79
SEC13-219	ENST00000492602	NBDY	A0A0U1RRE5	68 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602		M0R1X1	148 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	FCN1	O00602	326 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	SLC17A2	O00624	439 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	RBMXL2	O75526	392 aa	Known RBP	3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	UCHL1	P09936	223 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	DEFA4	P12838	97 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	CD36	P16671	472 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	CBLN1	P23435	193 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	ADM	P35318	185 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	FUS	P35637	526 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	OR3A3	P47888	321 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	HAMP	P81172	84 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	ATP5G2	Q06055	141 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	MLLT11	Q13015	90 aa	Predicted RBP	3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	ICAM4	Q14773	271 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	PSG5	Q15238	335 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	HMGN3	Q15651	99 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	FAM106A	Q4KMX7	169 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	OGFRL1	Q5TC84	451 aa	Predicted RBP	3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	PRSS48	Q7RTY5	328 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	SLC38A6	Q8IZM9	456 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	FAM89B	Q8N5H3	189 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	OR2C3	Q8N628	320 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	TEX45	Q8NA69	505 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	ZNF439	Q8NDP4	499 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	OR5AN1	Q8NGI8	311 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	GRPEL2	Q8TAA5	225 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	PTX4	Q96A99	478 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	MGLL	Q99685	303 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	SULT4A1	Q9BR01	284 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	C11orf54	Q9H0W9	315 aa	Predicted RBP	3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	ATG5	Q9H1Y0	275 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	FBXL15	Q9H469	300 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	SLC35D1	Q9NTN3	355 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	COA4	Q9NYJ1	87 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	RDH8	Q9NYR8	311 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	THYN1	Q9P016	225 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	MLX	Q9UH92	298 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	AK3	Q9UIJ7	227 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	SSR3	Q9UNL2	185 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	GAB2	Q9UQC2	676 aa		3.87	□□□□□ -1.79
SEC13-219	ENST00000492602	PKHD1L1	Q86WI1	4243 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602		A0A075B6Q4	140 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	TRAV1-2	A0A0B4J238	106 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	IGHV4-28	A0A0C4DH34	117 aa		3.86	□□□□□ -1.79
SEC13-219	ENST00000492602	TMEM14DP	A8MWL7	114 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms