RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 SIX6O95475 246 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 IGLV2-23P01705 113 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 SNRNP70P08621 437 aaKnown RBP7.76□□□□□ -1.17
USP54-214ENST00000492357 G6PCP35575 357 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 NUP62P37198 522 aaPredicted RBP7.76□□□□□ -1.17
USP54-214ENST00000492357 P2RY1P47900 373 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 REG1BP48304 166 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 COMPP49747 757 aaPredicted RBP7.76□□□□□ -1.17
USP54-214ENST00000492357 HSPE1P61604 102 aaKnown RBP7.76□□□□□ -1.17
USP54-214ENST00000492357 RPL8P62917 257 aaKnown RBP7.76□□□□□ -1.17
USP54-214ENST00000492357 RELBQ01201 579 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 TNFRSF9Q07011 255 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 OR2F1Q13607 317 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 DIAPH2-AS1Q14236 149 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 LRRC75BQ2VPJ9 315 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 OR2B11Q5JQS5 317 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 KLF17Q5JT82 389 aaPredicted RBP7.76□□□□□ -1.17
USP54-214ENST00000492357 LHFPL4Q7Z7J7 247 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 OR5R1Q8NH85 324 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 EAF1Q96JC9 268 aaPredicted RBP7.76□□□□□ -1.17
USP54-214ENST00000492357 ZNRD1Q9P1U0 126 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 KIAA1456Q9P272 454 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 A0A0D9SG52 128 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 A0A0G2JRQ6 117 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 MPTX1A8MV57 137 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 A8MV72 311 aaPredicted RBP7.75□□□□□ -1.17
USP54-214ENST00000492357 G3V3Q6 166 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 NBR2O15453 112 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 SYNGR2O43760 224 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 TSC22D2O75157 780 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 MBPP02686 304 aaPredicted RBP7.75□□□□□ -1.17
USP54-214ENST00000492357 CRYGBP07316 175 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 SAA1P0DJI8 122 aaPredicted RBP7.75□□□□□ -1.17
USP54-214ENST00000492357 RPP30P78346 268 aaKnown RBP7.75□□□□□ -1.17
USP54-214ENST00000492357 RAB32Q13637 225 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 PSG5Q15238 335 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 PPP1R27Q86WC6 154 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 TMEM86BQ8N661 226 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 INO80EQ8NBZ0 244 aaPredicted RBP7.75□□□□□ -1.17
USP54-214ENST00000492357 SMIM8Q96KF7 97 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 AQP10Q96PS8 301 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 CLCC1Q96S66 551 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 CHIAQ9BZP6 476 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 COMMD5Q9GZQ3 224 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 PRR13Q9NZ81 148 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 GSKIPQ9P0R6 139 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 HILPDAQ9Y5L2 63 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 ITPR3Q14573 2671 aa7.75□□□□□ -1.17
USP54-214ENST00000492357 A0A1W2PN81 502 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 K7EPK0 472 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 RRHO14718 337 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 IGKV1D-33P01593 117 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 IGKV1-33P01594 117 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 IGHV4-38-2P0DP08 117 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 CHRNA7P36544 502 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 LINC00205P59089 165 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 RPL23AP62750 156 aaKnown RBP7.74□□□□□ -1.17
USP54-214ENST00000492357 PRCDQ00LT1 54 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 BAXQ07812 192 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 Q6ZRM9 215 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 ACOT7LQ6ZUV0 252 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 ZNF546Q86UE3 836 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 OR1L8Q8NGR8 309 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 WDR89Q96FK6 387 aaPredicted RBP7.74□□□□□ -1.17
USP54-214ENST00000492357 TMEM68Q96MH6 324 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 SLC25A31Q9H0C2 315 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 C11orf1Q9H5F2 150 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 ZNF580Q9UK33 172 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 TNFSF18Q9UNG2 199 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 RCL1Q9Y2P8 373 aaKnown RBP7.74□□□□□ -1.17
USP54-214ENST00000492357 SIGLEC9Q9Y336 463 aa7.74□□□□□ -1.17
USP54-214ENST00000492357 CCDC168Q8NDH2 2452 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 MED13LQ71F56 2210 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 TRAV14DV4A0A0A6YYC5 116 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 SRRM4A7MD48 611 aaKnown RBP7.73□□□□□ -1.17
USP54-214ENST00000492357 BOLA2-SMG1P6H3BVE0 249 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 L7N2F9 121 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 TAAR5O14804 337 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 RBMXL2O75526 392 aaKnown RBP7.73□□□□□ -1.17
USP54-214ENST00000492357 ACTL6BO94805 426 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 AVPP01185 164 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 HLA-DRB1P01911 266 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 OR9G9P0C7N8 305 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 TMEM11P17152 192 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 DLX1P56177 255 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 VAMP2P63027 116 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 KRTAP1-1Q07627 177 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 CD300CQ08708 224 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 HES1Q14469 280 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 MMDQ15546 238 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 PRSS8Q16651 343 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 C5orf64Q2M2E5 130 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 DYNAPQ8N1N2 210 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 STPG2Q8N412 459 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 OR1L6Q8NGR2 347 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 RNF126Q9BV68 326 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 HIPK2Q9H2X6 1198 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 LYRM2Q9NU23 88 aaPredicted RBP7.73□□□□□ -1.17
USP54-214ENST00000492357 MBD2Q9UBB5 411 aa7.73□□□□□ -1.17
USP54-214ENST00000492357 TCF19Q9Y242 345 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms