RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 A0A1B0GWJ7 208 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 UBE2CO00762 179 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 HPRT1P00492 218 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 IFNA4P05014 189 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 ATP5G3P48201 142 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 FOXC1Q12948 553 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 CDPF1Q6NVV7 123 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 MRGPRGQ86SM5 289 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 PINX1Q96BK5 328 aaKnown RBP10.24□□□□□ -0.77
HMGN1-220ENST00000492280 MS4A5Q9H3V2 200 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 CACNA1BQ00975 2339 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 PIGBOS1A0A0B4J2F0 54 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 YPEL1O60688 119 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 FCN3O75636 299 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 IGHV2-5P01817 119 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 HNF1AP20823 631 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 CD1BP29016 333 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 BSPH1Q075Z2 132 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 KDF1Q8NAX2 398 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-220ENST00000492280 FAM57AQ8TBR7 257 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 YPEL2Q96QA6 119 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 PARLQ9H300 379 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 SDF2L1Q9HCN8 221 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 ZFHX3Q15911 3703 aa10.24□□□□□ -0.77
HMGN1-220ENST00000492280 CTXND1A0A1B0GTU2 59 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 ERVK-16P61578 105 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 STUMQ69YW2 141 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 PPP1R35Q8TAP8 253 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 LRFN3Q9BTN0 628 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 GFOD1Q9NXC2 390 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 TCF19Q9Y242 345 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 DPRXA6NFQ7 191 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 F2RL2O00254 374 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 GFRA3O60609 400 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 TIMP3P35625 211 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 CDC34P49427 236 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-220ENST00000492280 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 OR4A47Q6IF82 309 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 TREML4Q6UXN2 200 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 Q8NA96 180 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 ZNF251Q9BRH9 671 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 DOK5Q9P104 306 aa10.23□□□□□ -0.77
HMGN1-220ENST00000492280 TRGV10A0A0A0MS01 117 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 KBTBD11-OT1A0A1B0GTJ5 212 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 OR4A8P0C604 315 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 NPPCP23582 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 CEACAM8P31997 349 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-220ENST00000492280 NBL1P41271 181 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 MRPS11P82912 194 aaKnown RBP10.22□□□□□ -0.77
HMGN1-220ENST00000492280 MZT1Q08AG7 82 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 DIAPH2-AS1Q14236 149 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 CST9LP1Q5W188 147 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 C16orf82Q7Z2V1 217 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 CIB3Q96Q77 187 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-220ENST00000492280 SFXN3Q9BWM7 321 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 VPS13CQ709C8 3753 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 SRRM4A7MD48 611 aaKnown RBP10.22□□□□□ -0.77
HMGN1-220ENST00000492280 MKRN2OSH3BPM6 223 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 AP4M1O00189 453 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 CGB3P0DN86 165 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 CGB7P0DN87 165 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 NUBP1P53384 320 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST2H2BEQ16778 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-220ENST00000492280 ZCCHC14Q8WYQ9 949 aaKnown RBP10.22□□□□□ -0.77
HMGN1-220ENST00000492280 DDB2Q92466 427 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 CCL17Q92583 94 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BHQ93079 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 MGST2Q99735 147 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BNQ99877 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 HIST1H2BMQ99879 126 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 NIT2Q9NQR4 276 aa10.22□□□□□ -0.77
HMGN1-220ENST00000492280 RALYQ9UKM9 306 aaKnown RBP10.22□□□□□ -0.77
HMGN1-220ENST00000492280 CRYABP02511 175 aaKnown RBP10.21□□□□□ -0.77
HMGN1-220ENST00000492280 THBDP07204 575 aa10.21□□□□□ -0.77
HMGN1-220ENST00000492280 GATA2P23769 480 aaPredicted RBP10.21□□□□□ -0.77
HMGN1-220ENST00000492280 VDAC2P45880 294 aaPredicted RBP10.21□□□□□ -0.77
HMGN1-220ENST00000492280 PSMB3P49720 205 aa10.21□□□□□ -0.77
HMGN1-220ENST00000492280 ADIPOQQ15848 244 aa10.21□□□□□ -0.77
HMGN1-220ENST00000492280 FRZBQ92765 325 aa10.21□□□□□ -0.77
HMGN1-220ENST00000492280 C1orf159Q96HA4 380 aa10.21□□□□□ -0.77
HMGN1-220ENST00000492280 ACTR3CQ9C0K3 210 aaPredicted RBP10.21□□□□□ -0.77
HMGN1-220ENST00000492280 TUBG2Q9NRH3 451 aa10.21□□□□□ -0.77
HMGN1-220ENST00000492280 LAMP3Q9UQV4 416 aa10.21□□□□□ -0.77
HMGN1-220ENST00000492280 IFNA1P01562 189 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 SELENOVP59797 346 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.78
HMGN1-220ENST00000492280 MLANAQ16655 118 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 ARSJQ5FYB0 599 aaPredicted RBP10.21□□□□□ -0.78
HMGN1-220ENST00000492280 TRAT1Q6PIZ9 186 aa10.21□□□□□ -0.78
HMGN1-220ENST00000492280 GFRALQ6UXV0 394 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms