RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	EXOSC2	Q13868	293 aa	Known RBP	11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	MZT2A	Q6P582	158 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	CNIH2	Q6PI25	160 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	HOGA1	Q86XE5	327 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	FAM223A	Q8IWN6	122 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	DYNC2LI1	Q8TCX1	351 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	SPIN2A	Q99865	258 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	SPIN2B	Q9BPZ2	258 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170	ANAPC10	Q9UM13	185 aa		11.67	□□□□□ -0.54
MRPL55-231	ENST00000492170		H3BMQ9	156 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	HPGDS	O60760	199 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	RBMXL2	O75526	392 aa	Known RBP	11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	TUSC2	O75896	110 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	HLA-DQB1	P01920	261 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	IFNA6	P05013	189 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	CTXN2	P0C2S0	81 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	SAA1	P0DJI8	122 aa	Predicted RBP	11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	ELK1	P19419	428 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	CBX5	P45973	191 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	CDK10	Q15131	360 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	HAGH	Q16775	308 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	ZNF645	Q8N7E2	425 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	GVQW1	Q8N7I0	195 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	BEST4	Q8NFU0	473 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	OR2K2	Q8NGT1	345 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	THAP7	Q9BT49	309 aa	Predicted RBP	11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	DCUN1D5	Q9BTE7	237 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	CCDC59	Q9P031	241 aa	Known RBP	11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	CEPT1	Q9Y6K0	416 aa		11.66	□□□□□ -0.54
MRPL55-231	ENST00000492170	CSMD3	Q7Z407	3707 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	FCGR3B	O75015	233 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	ATP5G2	Q06055	141 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	KCTD9	Q7L273	389 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	MMD2	Q8IY49	270 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	RBM38	Q9H0Z9	239 aa	Known RBP	11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	AKIP1	Q9NQ31	210 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	MRPS7	Q9Y2R9	242 aa	Known RBP	11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	PRELID3B	Q9Y3B1	194 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	TNC	P24821	2201 aa		11.65	□□□□□ -0.54
MRPL55-231	ENST00000492170	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	TRBV9	A0A0B4J1U6	114 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	IZUMO1R	A6ND01	250 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170		J3QRK9	145 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	BMPR1B	O00238	502 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	NOL3	O60936	208 aa	Known RBP	11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	SLC22A5	O76082	557 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	PRH1	P02810	166 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	NAT1	P18440	290 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	FAM209B	Q5JX69	171 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	SLC25A42	Q86VD7	318 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	DYNLRB2	Q8TF09	96 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	OR2W1	Q9Y3N9	320 aa		11.64	□□□□□ -0.55
MRPL55-231	ENST00000492170	TPPP	O94811	219 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	NFYA	P23511	347 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	PRSS3	P35030	304 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	CD81	P60033	236 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	ZNF45	Q02386	682 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	OR2B11	Q5JQS5	317 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	C10orf55	Q5SWW7	151 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	LAX1	Q8IWV1	398 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	TTC9C	Q8N5M4	171 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	NECAP1	Q8NC96	275 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	GPX8	Q8TED1	209 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	MIXL1	Q9H2W2	232 aa		11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	GAR1	Q9NY12	217 aa	Known RBP	11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	RBMX2	Q9Y388	322 aa	Known RBP	11.63	□□□□□ -0.55
MRPL55-231	ENST00000492170	SMIM31	A0A1B0GVY4	71 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	MEIS3P1	A6NDR6	274 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	MECP2	P51608	486 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	C15orf32	Q32M92	178 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	CD300E	Q496F6	205 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	OR5AP2	Q8NGF4	316 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	OR4S2	Q8NH73	311 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	VSTM2A	Q8TAG5	236 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	SLIRP	Q9GZT3	109 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	PLEKHA3	Q9HB20	300 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	SCPEP1	Q9HB40	452 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	SLC2A8	Q9NY64	477 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	ZNF257	Q9Y2Q1	563 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	DNAH1	Q9P2D7	4330 aa		11.62	□□□□□ -0.55
MRPL55-231	ENST00000492170	IGKV1D-13	A0A0B4J2D9	117 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	DPPA5	A6NC42	116 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	ZNF701	M0R085	212 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	SULT1C2	O00338	296 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	OR2J3	O76001	311 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	IGKV1-13	P0DP09	117 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	ARPC4	P59998	168 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	TCTEX1D2	Q8WW35	142 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	HSD17B10	Q99714	261 aa	Known RBP	11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	NEURL2	Q9BR09	285 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	NXF2	Q9GZY0	626 aa	Known RBP	11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	IFT46	Q9NQC8	304 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	EXTL2	Q9UBQ6	330 aa		11.61	□□□□□ -0.55
MRPL55-231	ENST00000492170	HMX3	A6NHT5	357 aa		11.6	□□□□□ -0.55
MRPL55-231	ENST00000492170	FAM25A	B3EWG3	89 aa		11.6	□□□□□ -0.55
MRPL55-231	ENST00000492170	FAM25C	B3EWG5	89 aa		11.6	□□□□□ -0.55
MRPL55-231	ENST00000492170	FAM25G	B3EWG6	89 aa		11.6	□□□□□ -0.55
MRPL55-231	ENST00000492170	CTDSP2	O14595	271 aa		11.6	□□□□□ -0.55
MRPL55-231	ENST00000492170	GGCT	O75223	188 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms