RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 Q6ZNX1 250 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 OR2T10Q8NGZ9 312 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 RNASE11Q8TAA1 199 aaKnown RBP10.85□□□□□ -0.67
CDK9-204ENST00000491521 OR51J1Q9H342 316 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 SERTAD4Q9NUC0 356 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 hCG_2014768A0A024R1R8 64 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 A0A0B4J293 547 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 SH2D7A6NKC9 451 aaPredicted RBP10.84□□□□□ -0.67
CDK9-204ENST00000491521 RBFOX2O43251 390 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDK9-204ENST00000491521 ATG12O94817 140 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 S1PR2O95136 353 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 CDS2O95674 445 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 MOSP00540 346 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 HRASP01112 189 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 KRASP01116 189 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 IGKV1-16P04430 117 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 TMEM11P17152 192 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 DYNLT3P51808 116 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 ERVK-16P61578 105 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 SELENOHQ8IZQ5 122 aaKnown RBP10.84□□□□□ -0.67
CDK9-204ENST00000491521 DMBX1Q8NFW5 382 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 MITD1Q8WV92 249 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 R3HDM4Q96D70 268 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 AIFM2Q9BRQ8 373 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 PLEKHA2Q9HB19 425 aa10.84□□□□□ -0.67
CDK9-204ENST00000491521 FAM212BQ9NTI7 297 aaPredicted RBP10.84□□□□□ -0.67
CDK9-204ENST00000491521 PIGBOS1A0A0B4J2F0 54 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 A0A1W2PRX2 142 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 C7orf66A4D0T2 115 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 HOXB5P09067 269 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 G6PCP35575 357 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 AKR1C2P52895 323 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 FBLN7Q53RD9 439 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 SSX9Q7RTT3 188 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 LYZL2Q7Z4W2 148 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 THNSL2Q86YJ6 484 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 Q8N2B8 174 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 OSR1Q8TAX0 266 aaPredicted RBP10.83□□□□□ -0.68
CDK9-204ENST00000491521 RBPMSQ93062 196 aaKnown RBP10.83□□□□□ -0.68
CDK9-204ENST00000491521 RRNAD1Q96FB5 475 aaKnown RBP10.83□□□□□ -0.68
CDK9-204ENST00000491521 EAF1Q96JC9 268 aaPredicted RBP10.83□□□□□ -0.68
CDK9-204ENST00000491521 HARBI1Q96MB7 349 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 TMEM56Q96MV1 263 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
CDK9-204ENST00000491521 MED28Q9H204 178 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 TMEM56-RWDD3S4R434 201 aa10.83□□□□□ -0.68
CDK9-204ENST00000491521 A0A0B4J2A0 478 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 NCBP2LA6PVI3 153 aaKnown RBP10.82□□□□□ -0.68
CDK9-204ENST00000491521 G3V4G9 280 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 IFNA21P01568 189 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 IGKV1-39P01597 117 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 IGKV1D-39P04432 117 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 NQO2P16083 231 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 LGALS7P47929 136 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 H2BFWTQ7Z2G1 175 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 VKORC1L1Q8N0U8 176 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 SLC35G3Q8N808 338 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 LHFPL5Q8TAF8 219 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 IL22RA2Q969J5 263 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 RITA1Q96K30 269 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 RNF5Q99942 180 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
CDK9-204ENST00000491521 SLC25A33Q9BSK2 321 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 COMMD9Q9P000 198 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 SHPKQ9UHJ6 478 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 NOTCH3Q9UM47 2321 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 PLXNB1O43157 2135 aa10.82□□□□□ -0.68
CDK9-204ENST00000491521 C13orf42A0A1B0GVH6 325 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 FAM90A9PA6NNJ1 464 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 FAM25EA8MYX2 175 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 ADAP1O75689 374 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 OPN1MWP04001 364 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 OPN1MW2P0DN77 364 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 OPN1MW3P0DN78 364 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 PLGLAQ15195 96 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 MMDQ15546 238 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 VMA21Q3ZAQ7 101 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 LRTM2Q8N967 370 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 RHOVQ96L33 236 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 KIAA1456Q9P272 454 aa10.81□□□□□ -0.68
CDK9-204ENST00000491521 A0A1B0GVG6 124 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 C5orf51A6NDU8 294 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 MARCH11A6NNE9 402 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 SRRM4A7MD48 611 aaKnown RBP10.8□□□□□ -0.68
CDK9-204ENST00000491521 GOSR2O14653 212 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 IGKV1-5P01602 117 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 PRB2P02812 416 aaPredicted RBP10.8□□□□□ -0.68
CDK9-204ENST00000491521 CNTFRP26992 372 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 EBI3Q14213 229 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 PSG5Q15238 335 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 GGNBP1Q5YKI7 109 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 CENPVQ7Z7K6 275 aaPredicted RBP10.8□□□□□ -0.68
CDK9-204ENST00000491521 OR5AU1Q8NGC0 362 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 SEC22AQ96IW7 307 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 MGAT4CQ9UBM8 478 aa10.8□□□□□ -0.68
CDK9-204ENST00000491521 METTL1Q9UBP6 276 aaKnown RBP10.8□□□□□ -0.68
CDK9-204ENST00000491521 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
CDK9-204ENST00000491521 CCSO14618 274 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms