RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 PTHLHP12272 177 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 FCGR2CP31995 323 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 KIR2DS2P43631 304 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 ZNF45Q02386 682 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 EIF4EBP1Q13541 118 aaPredicted RBP6.31□□□□□ -1.4
LSM2-213ENST00000491421 MSMO1Q15800 293 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 TIMM50Q3ZCQ8 353 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 IL34Q6ZMJ4 242 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 SLC25A42Q86VD7 318 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 CROCCP3Q8IVE0 287 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
LSM2-213ENST00000491421 MFSD4AQ8N468 514 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 TTC9CQ8N5M4 171 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 NECAP1Q8NC96 275 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 OR13F1Q8NGS4 319 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 TMEM167AQ8TBQ9 72 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 SECTM1Q8WVN6 248 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 SNAPC3Q92966 411 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 RCHY1Q96PM5 261 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 OR2A7Q96R45 310 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 AUNIPQ9H7T9 357 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 ADAM30Q9UKF2 790 aa6.31□□□□□ -1.4
LSM2-213ENST00000491421 DPPA5A6NC42 116 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 HMX3A6NHT5 357 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 TEX22C9J3V5 150 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 BMPR1BO00238 502 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 AIREO43918 545 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 OR2J3O76001 311 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 HRASP01112 189 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 PPYP01298 95 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 IGHV4-30-4P0DP06 118 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 MAS1LP35410 378 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 CBX5P45973 191 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 RPL27AP46776 148 aaKnown RBP6.3□□□□□ -1.4
LSM2-213ENST00000491421 BRWD1-AS2P59051 145 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 FXYD4P59646 89 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 C15orf32Q32M92 178 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 LCN12Q6JVE5 192 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 SSX9Q7RTT3 188 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 SGPP2Q8IWX5 399 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 OR5AP2Q8NGF4 316 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 FYTTD1Q96QD9 318 aaKnown RBP6.3□□□□□ -1.4
LSM2-213ENST00000491421 GPHA2Q96T91 129 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 SLC5A7Q9GZV3 580 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 ZMAT4Q9H898 229 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 VCX3AQ9NNX9 186 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 IFT46Q9NQC8 304 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 CCL28Q9NRJ3 127 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 PEMTQ9UBM1 199 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 ZNF257Q9Y2Q1 563 aa6.3□□□□□ -1.4
LSM2-213ENST00000491421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.29□□□□□ -1.4
LSM2-213ENST00000491421 MEIS3P1A6NDR6 274 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 NPIPB5A8MRT5 1133 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 C3orf84H3BNL1 204 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 SULT1C2O00338 296 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 DHFRP00374 187 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 CSN3P07498 182 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 IL6RP08887 468 aaPredicted RBP6.29□□□□□ -1.4
LSM2-213ENST00000491421 ZNF735P0CB33 412 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 HLA-GP17693 338 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 TGFBR1P36897 503 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 RPL8P62917 257 aaKnown RBP6.29□□□□□ -1.4
LSM2-213ENST00000491421 CATR1Q13166 79 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 LINC01559Q495D7 138 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 FAM209BQ5JX69 171 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 UBE2NLQ5JXB2 153 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 C19orf35Q6ZS72 473 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 GTSCR1Q86UQ5 136 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 TMEM17Q86X19 198 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 SPAG16Q8N0X2 631 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 Q8N1Y9 231 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 Q8N402 240 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 OR2C3Q8N628 320 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 SAMD12Q8N8I0 201 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 ZBTB34Q8NCN2 500 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 OR4A5Q8NH83 315 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 S100A16Q96FQ6 103 aaKnown RBP6.29□□□□□ -1.4
LSM2-213ENST00000491421 AIFM2Q9BRQ8 373 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 HRASLSQ9HDD0 168 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 SLC2A9Q9NRM0 540 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 SIGLEC8Q9NYZ4 499 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 FBXL7Q9UJT9 491 aa6.29□□□□□ -1.4
LSM2-213ENST00000491421 A0A087WXM4 84 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 A0A1B0GW64 132 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 A8MZ25 164 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 PPP5D1E7EU14 171 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 E7EUB6 86 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
LSM2-213ENST00000491421 XRCC3O43542 346 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 TNFAIP8O95379 198 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 AREGP15514 252 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 NAT1P18440 290 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 RPS19P39019 145 aaKnown RBP6.28□□□□□ -1.4
LSM2-213ENST00000491421 TAS2R31P59538 309 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 HERV-K104P61576 105 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 LSM3P62310 102 aaKnown RBP6.28□□□□□ -1.4
LSM2-213ENST00000491421 TMEM69Q5SWH9 247 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 AADACL3Q5VUY0 350 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 OR4A47Q6IF82 309 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 ZNF818PQ6ZRF7 136 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms