RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 OR2A4O95047 310 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 OR9G9P0C7N8 305 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 GSG1LQ6UXU4 331 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 Q6ZRM9 215 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 SIGLECL1Q8N7X8 197 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 NPBQ8NG41 125 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 VSTM2AQ8TAG5 236 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 OR2A7Q96R45 310 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 PLSCR3Q9NRY6 295 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 CUBNO60494 3623 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 NDUFA3O95167 84 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 IL6RP08887 468 aaPredicted RBP17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 TMEM219Q86XT9 240 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 SSMEM1Q8WWF3 244 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 TPSG1Q9NRR2 321 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 KIAA1456Q9P272 454 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 CACNG5Q9UF02 275 aa17.35■□□□□ 0.37
VCPKMT-204ENST00000491402 PLXNB1O43157 2135 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 TRAV3A0A0B4J244 114 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 RRHO14718 337 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 KBTBD11O94819 623 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 TRAPPC2P0DI81 140 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 TRAPPC2BP0DI82 140 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 LY6EQ16553 131 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 IAH1Q2TAA2 248 aaPredicted RBP17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 OR8H1Q8NGG4 311 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 OR5R1Q8NH85 324 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 METTL1Q9UBP6 276 aaKnown RBP17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 PITPNC1Q9UKF7 332 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 NSG2Q9Y328 171 aa17.34■□□□□ 0.37
VCPKMT-204ENST00000491402 A0A1B0GU03 582 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 A6NDX4 124 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 NCBP2LA6PVI3 153 aaKnown RBP17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 CRYGBP07316 175 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 SLC25A6P12236 298 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 TEX45Q8NA69 505 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 CHAC2Q8WUX2 184 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 RBM14Q96PK6 669 aaKnown RBP17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 SPIN2AQ99865 258 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 SPIN2BQ9BPZ2 258 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 SLC25A33Q9BSK2 321 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 PDCD10Q9BUL8 212 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 FBXL15Q9H469 300 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 SIGLEC9Q9Y336 463 aa17.33■□□□□ 0.37
VCPKMT-204ENST00000491402 BTBD17A6NE02 478 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 HOXA3O43365 443 aaPredicted RBP17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 OR2F2O95006 317 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 RELBQ01201 579 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 SMCO1Q147U7 214 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 THOC7Q6I9Y2 204 aaKnown RBP17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 FAM71E2Q8N5Q1 922 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 OR4A5Q8NH83 315 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 RANBP3Q9H6Z4 567 aaPredicted RBP17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 COA4Q9NYJ1 87 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 C1RLQ9NZP8 487 aa17.33■□□□□ 0.36
VCPKMT-204ENST00000491402 TET2Q6N021 2002 aaPredicted RBP17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 UPK2O00526 184 aa17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 OR2B8PP59922 312 aa17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 PLGLAQ15195 96 aa17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 PPP1R27Q86WC6 154 aa17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 TMEM167AQ8TBQ9 72 aa17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 C2orf50Q96LR7 162 aa17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 ZNF436Q9C0F3 470 aaPredicted RBP17.32■□□□□ 0.36
VCPKMT-204ENST00000491402 RBMXL2O75526 392 aaKnown RBP17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 SNAPC5O75971 98 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 C5orf64Q2M2E5 130 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 RBMS3Q6XE24 437 aaKnown RBP17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 Q8N9W7 124 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 OR4A16Q8NH70 328 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 CHIAQ9BZP6 476 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 GSKIPQ9P0R6 139 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 VPREB3Q9UKI3 123 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 MOB4Q9Y3A3 225 aa17.31■□□□□ 0.36
VCPKMT-204ENST00000491402 C15orf61A6NNL5 157 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 PITX3O75364 302 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 CD83Q01151 205 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 PJVKQ0ZLH3 352 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 MRGPRG-AS1Q2M3A8 158 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 ZBTB8BQ8NAP8 495 aaPredicted RBP17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 WDR89Q96FK6 387 aaPredicted RBP17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 ZNF430Q9H8G1 570 aaPredicted RBP17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 TNFRSF19Q9NS68 423 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 RPL8P62917 257 aaKnown RBP17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 OR1S1Q8NH92 325 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 NMES1Q9C002 83 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 TMEM14BQ9NUH8 114 aa17.3■□□□□ 0.36
VCPKMT-204ENST00000491402 CHST1O43916 411 aa17.29■□□□□ 0.36
VCPKMT-204ENST00000491402 PRSS8Q16651 343 aa17.29■□□□□ 0.36
VCPKMT-204ENST00000491402 C16orf82Q7Z2V1 217 aa17.29■□□□□ 0.36
VCPKMT-204ENST00000491402 FOXRED2Q8IWF2 684 aa17.29■□□□□ 0.36
VCPKMT-204ENST00000491402 OR4D5Q8NGN0 318 aa17.29■□□□□ 0.36
VCPKMT-204ENST00000491402 FOXA2Q9Y261 457 aaPredicted RBP17.29■□□□□ 0.36
VCPKMT-204ENST00000491402 POMT1Q9Y6A1 747 aa17.29■□□□□ 0.36
VCPKMT-204ENST00000491402 NXPH3O95157 252 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 FGF2P09038 288 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 GIPP09681 153 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 SRSF4Q08170 494 aaKnown RBP17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 ZNF429Q86V71 674 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 MMD2Q8IY49 270 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms