RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RAB2BQ8WUD1 216 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 TAS2R8Q9NYW2 309 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 COMMD3Q9UBI1 195 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 RABL2AQ9UBK7 228 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 RABL2BQ9UNT1 228 aa12.75□□□□□ -0.37
PDLIM2-217ENST00000491330 TNCP24821 2201 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 RBFOX2O43251 390 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 PPYP01298 95 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 APELAP0DMC3 54 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 DEFA4P12838 97 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 RHOGP84095 191 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 LCN12Q6JVE5 192 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 DHRS11Q6UWP2 260 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 GTSCR1Q86UQ5 136 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 GVQW1Q8N7I0 195 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 ADAD2Q8NCV1 583 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 SLC5A7Q9GZV3 580 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 HRASLSQ9HDD0 168 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 ZNF257Q9Y2Q1 563 aa12.74□□□□□ -0.37
PDLIM2-217ENST00000491330 KBTBD11O94819 623 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 FGF2P09038 288 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 HIST1H1BP16401 226 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 RPL27AP46776 148 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 TMBIM6P55061 237 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 SYNJ2BPP57105 145 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 DYRK1AQ13627 763 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 KLF5Q13887 457 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 TTC9CQ8N5M4 171 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 C5orf30Q96GV9 206 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 FYTTD1Q96QD9 318 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 ASCL2Q99929 193 aa12.73□□□□□ -0.37
PDLIM2-217ENST00000491330 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 RPL5P46777 297 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 FXYD4P59646 89 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 ERVK-16P61578 105 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 RPL8P62917 257 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 EIF4EBP1Q13541 118 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 CMTM1Q8IZ96 169 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 SPAG16Q8N0X2 631 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 OR5H2Q8NGV7 314 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 TMEM167AQ8TBQ9 72 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 GPX8Q8TED1 209 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 THYN1Q9P016 225 aa12.72□□□□□ -0.37
PDLIM2-217ENST00000491330 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 NOL3O60936 208 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 HPRT1P00492 218 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 IGLV1-51P01701 117 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 EIF4EP06730 217 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 NQO2P16083 231 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 RCVRNP35243 200 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 TAS2R31P59538 309 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 Q8N402 240 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 COMMD5Q9GZQ3 224 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 CCL28Q9NRJ3 127 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 SLC2A9Q9NRM0 540 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 SIGLEC8Q9NYZ4 499 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
PDLIM2-217ENST00000491330 TNFSF12O43508 249 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 TBPP20226 339 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 RPL30P62888 115 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 SSBP2P81877 361 aaPredicted RBP12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 MRPS10P82664 201 aaKnown RBP12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 AADACL3Q5VUY0 350 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 SSX9Q7RTT3 188 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 TMEM17Q86X19 198 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 VKORC1L1Q8N0U8 176 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 CADM3Q8N126 398 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 DMBX1Q8NFW5 382 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 OR2K2Q8NGT1 345 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 OR6F1Q8NGZ6 308 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 DYNLRB2Q8TF09 96 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 TUBA4BQ9H853 241 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 AKIP1Q9NQ31 210 aa12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 FAM212BQ9NTI7 297 aaPredicted RBP12.7□□□□□ -0.38
PDLIM2-217ENST00000491330 NPIPB5A8MRT5 1133 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 GGCTO75223 188 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 HLA-GP17693 338 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 ELK1P19419 428 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 C15orf32Q32M92 178 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 FAM106AQ4KMX7 169 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 THOC7Q6I9Y2 204 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 PUSL1Q8N0Z8 303 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 EEF1AKMT3Q96AZ1 226 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 CXorf58Q96LI9 332 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 BET1LQ9NYM9 111 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 FBXL7Q9UJT9 491 aa12.69□□□□□ -0.38
PDLIM2-217ENST00000491330 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 TRBV9A0A0B4J1U6 114 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 FAM25AB3EWG3 89 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 FAM25CB3EWG5 89 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 FAM25GB3EWG6 89 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 HPGDSO60760 199 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 OR2J3O76001 311 aa12.68□□□□□ -0.38
PDLIM2-217ENST00000491330 FRMD6-AS1P0C7T7 363 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms