RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	NEURL2	Q9BR09	285 aa		13.56	□□□□□ -0.24
GGA1-223	ENST00000491295	TXNL4B	Q9NX01	149 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-223	ENST00000491295	KLK9	Q9UKQ9	250 aa		13.56	□□□□□ -0.24
GGA1-223	ENST00000491295	DMRT1	Q9Y5R6	373 aa		13.56	□□□□□ -0.24
GGA1-223	ENST00000491295	TEX22	C9J3V5	150 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	CRYGC	P07315	174 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	ZNF735	P0CB33	412 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	FOLR2	P14207	255 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	HIST1H1B	P16401	226 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	C10orf55	Q5SWW7	151 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	ADAMTSL5	Q6ZMM2	481 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	TCTEX1D2	Q8WW35	142 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	HIPK2	Q9H2X6	1198 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	ZC4H2	Q9NQZ6	224 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	FBXL7	Q9UJT9	491 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	SPATA2	Q9UM82	520 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	SSR3	Q9UNL2	185 aa		13.55	□□□□□ -0.24
GGA1-223	ENST00000491295	CSMD3	Q7Z407	3707 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	IGKV1D-13	A0A0B4J2D9	117 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	TMEM235	A6NFC5	223 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	C2orf70	A6NJV1	201 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	IGKV1-13	P0DP09	117 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	FAM106A	Q4KMX7	169 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	OR2B11	Q5JQS5	317 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	VKORC1L1	Q8N0U8	176 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	ZBTB34	Q8NCN2	500 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	OR4A5	Q8NH83	315 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	NUDCD2	Q8WVJ2	157 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	FYTTD1	Q96QD9	318 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-223	ENST00000491295	DAPK2	Q9UIK4	370 aa		13.54	□□□□□ -0.24
GGA1-223	ENST00000491295		A0A0A6YYH2	397 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	HMX3	A6NHT5	357 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295		A6NJ64	397 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	OR2C1	O95371	312 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	IL6R	P08887	468 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	PSMB6	P28072	239 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	SFXN4	Q6P4A7	337 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	SPART	Q8N0X7	666 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	FANCD2OS	Q96PS1	177 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	PLEKHA3	Q9HB20	300 aa		13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	RRP15	Q9Y3B9	282 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-223	ENST00000491295	TRBV7-1	A0A0A6YYK4	115 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	SMIM30	A4D0T7	59 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	OR11H12	B2RN74	326 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	PPP5D1	E7EU14	171 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	SSX5	O60225	188 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	CTRB1	P17538	263 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	CBLN1	P23435	193 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	PSMB9	P28065	219 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	BRWD1-AS2	P59051	145 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	RPL8	P62917	257 aa	Known RBP	13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	CTRB2	Q6GPI1	263 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	OR4A47	Q6IF82	309 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	EEF1AKMT3	Q96AZ1	226 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	CXorf58	Q96LI9	332 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	RHBDL2	Q9NX52	303 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	BET1L	Q9NYM9	111 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	TAS2R8	Q9NYW2	309 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295	ETV7	Q9Y603	341 aa		13.52	□□□□□ -0.25
GGA1-223	ENST00000491295		E7EUB6	86 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	TMEM127	O75204	238 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	FGF2	P09038	288 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	CD7	P09564	240 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	DEFA4	P12838	97 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	HLA-G	P17693	338 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	ARL3	P36405	182 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	ARPC4	P59998	168 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	GUCA2B	Q16661	112 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	ANKRD55	Q3KP44	614 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	SLC16A13	Q7RTY0	426 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	BEST4	Q8NFU0	473 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	LGALS14	Q8TCE9	139 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	SRSF8	Q9BRL6	282 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	LYST	Q99698	3801 aa		13.51	□□□□□ -0.25
GGA1-223	ENST00000491295	RBMY1B	A6NDE4	496 aa	Known RBP	13.5	□□□□□ -0.25
GGA1-223	ENST00000491295	RBMY1E	A6NEQ0	496 aa	Known RBP	13.5	□□□□□ -0.25
GGA1-223	ENST00000491295		A8MWP6	167 aa		13.5	□□□□□ -0.25
GGA1-223	ENST00000491295	NDUFB8	O95169	186 aa		13.5	□□□□□ -0.25
GGA1-223	ENST00000491295	RBMY1D	P0C7P1	496 aa	Known RBP	13.5	□□□□□ -0.25
GGA1-223	ENST00000491295	FCGR2C	P31995	323 aa		13.5	□□□□□ -0.25
GGA1-223	ENST00000491295	CLEC19A	Q6UXS0	136 aa		13.5	□□□□□ -0.25
GGA1-223	ENST00000491295	HOGA1	Q86XE5	327 aa		13.5	□□□□□ -0.25
GGA1-223	ENST00000491295	CD300LF	Q8TDQ1	290 aa		13.5	□□□□□ -0.25
GGA1-223	ENST00000491295		Q9H521	79 aa		13.5	□□□□□ -0.25
GGA1-223	ENST00000491295		A0A1B0GW64	132 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	JTB	O76095	146 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	HLA-A	P01891	365 aa	Known RBP	13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	SDC2	P34741	201 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	TAS2R31	P59538	309 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	CATR1	Q13166	79 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	POU2AF1	Q16633	256 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	ZNF57	Q68EA5	555 aa	Predicted RBP	13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	SPAG16	Q8N0X2	631 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	DEFB125	Q8N687	156 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	OR13F1	Q8NGS4	319 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	SECTM1	Q8WVN6	248 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	BORCS5	Q969J3	196 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms