RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 K7EN84 100 aa16.14■□□□□ 0.17
SNAPC3-206ENST00000490969 TMEM45BQ96B21 275 aa16.14■□□□□ 0.17
SNAPC3-206ENST00000490969 GNB4Q9HAV0 340 aa16.14■□□□□ 0.17
SNAPC3-206ENST00000490969 TBL2Q9Y4P3 447 aaKnown RBP16.14■□□□□ 0.17
SNAPC3-206ENST00000490969 PTPRZ1P23471 2315 aaPredicted RBP16.14■□□□□ 0.17
SNAPC3-206ENST00000490969 J3QT63 122 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 RAB29O14966 203 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 CLDN14O95500 239 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 BRWD1-AS2P59051 145 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 H2BFWTQ7Z2G1 175 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 SPTBN2O15020 2390 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 P04436 131 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 OR5G3P0C626 314 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 STAG3L2P0CL84 134 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 STAG3L3P0CL85 134 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 FOXG1P55316 489 aaPredicted RBP16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 CATR1Q13166 79 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 EIF4EBP1Q13541 118 aaPredicted RBP16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 PIP4P1Q86T03 277 aa16.13■□□□□ 0.17
SNAPC3-206ENST00000490969 SH2D1BO14796 132 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 RAC2P15153 192 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 CA6P23280 308 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 STARD4Q96DR4 205 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 POM121L2Q96KW2 1035 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 NRN1Q9NPD7 142 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 TNFSF15O95150 251 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 CXorf1O96002 111 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 IGHEP01854 428 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 IGLC2P0DOY2 106 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 IGLC3P0DOY3 106 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 MED12LQ86YW9 2145 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 OR2M7Q8NG81 312 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 TXN2Q99757 166 aa16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 YTHDF2Q9Y5A9 579 aaKnown RBP16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 URB1O60287 2271 aaKnown RBP16.12■□□□□ 0.17
SNAPC3-206ENST00000490969 TRBV9A0A0B4J1U6 114 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 RRHO14718 337 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 HYPMO75409 117 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 MMP23AO75900 390 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 NEURL1O76050 574 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 RPEL1Q2QD12 228 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 Q6ZN92 141 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 MMD2Q8IY49 270 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 RNASE8Q8TDE3 154 aaKnown RBP16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 LAMTOR2Q9Y2Q5 125 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 A8MXE2 369 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 PRR33A8MZF0 331 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 CCL25O15444 150 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 AMTP48728 403 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 RPL31P62899 125 aaKnown RBP16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 ZNF718Q3SXZ3 478 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 FAM53AQ6NSI3 398 aaPredicted RBP16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 ORAOV1Q8WV07 137 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 GNB1LQ9BYB4 327 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 LINC00470Q9BZP3 86 aa16.11■□□□□ 0.17
SNAPC3-206ENST00000490969 OPRK1P41145 380 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 HNRNPA3P51991 378 aaKnown RBP16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 PTTG1IPP53801 180 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 RBX1P62877 108 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 TGFBR3Q03167 851 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 SFXN3Q9BWM7 321 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 ZNF253O75346 499 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 MPDU1O75352 247 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 ST6GALNAC3Q8NDV1 305 aa16.1■□□□□ 0.17
SNAPC3-206ENST00000490969 ZPBPQ9BS86 351 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 KCNIP1Q9NZI2 227 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 HTD2P86397 168 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 SSPNQ14714 243 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 PDLIM3Q53GG5 364 aaPredicted RBP16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 LEMD1Q68G75 181 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 OR8I2Q8N0Y5 310 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 OR52L2PQ8NGH6 319 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 GALMQ96C23 342 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 KCNS1Q96KK3 526 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 DEPPQ9NTK1 212 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 NAT8BQ9UHF3 227 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 FAM186AA6NE01 2351 aa16.09■□□□□ 0.17
SNAPC3-206ENST00000490969 SAA2-SAA4A0A096LPE2 208 aa16.08■□□□□ 0.17
SNAPC3-206ENST00000490969 SPATA46Q5T0L3 261 aa16.08■□□□□ 0.17
SNAPC3-206ENST00000490969 MIC13Q5XKP0 118 aa16.08■□□□□ 0.17
SNAPC3-206ENST00000490969 TREML4Q6UXN2 200 aa16.08■□□□□ 0.17
SNAPC3-206ENST00000490969 V9GYV3 84 aa16.08■□□□□ 0.17
SNAPC3-206ENST00000490969 IGKV3D-15A0A087WSY6 115 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 C9JCJ5 164 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 PMCHP20382 165 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 OR10J3Q5JRS4 329 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 EAF1Q96JC9 268 aaPredicted RBP16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 RCHY1Q96PM5 261 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 MGST2Q99735 147 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 GAL3ST2Q9H3Q3 398 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 PRRC2CQ9Y520 2896 aaKnown RBP16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 FRYQ5TBA9 3013 aa16.08■□□□□ 0.16
SNAPC3-206ENST00000490969 A0A1W2PS18 150 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 AQP7O14520 342 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 WISP2O76076 250 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 KLF3P57682 345 aaPredicted RBP16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 ERVK11-1P61568 191 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 ATP1A1-AS1Q5TC04 95 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 WDR86Q86TI4 376 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 Q8IYB0 196 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms