RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 COL4A4P53420 1690 aaPredicted RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 TRAV1-1A0A0B4J248 108 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 FAM157AC9JC47 383 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 M0R1B8 84 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 CLDN14O95500 239 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 HTR1DP28221 377 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 SLC25A53Q5H9E4 307 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 C1orf194Q5T5A4 169 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 OR10X1Q8NGY0 326 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 RNF2Q99496 336 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 RNASE7Q9H1E1 156 aaKnown RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 UBE2ZQ9H832 354 aaPredicted RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 IL36GQ9NZH8 169 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 IGHV3-21A0A0B4J1V1 117 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 GCHFRP30047 84 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 SOX8P57073 446 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 NHLH1Q02575 133 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 RNPS1Q15287 305 aaKnown RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 LYPD6Q86Y78 171 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 ZBTB34Q8NCN2 500 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 DCAF16Q9NXF7 216 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 LAMA3Q16787 3333 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 TRGV10A0A0A0MS01 117 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 PFN1P07737 140 aaKnown RBP10.84□□□□□ -0.67
SHOX2-205ENST00000490689 NPSP0C0P6 89 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 RND2P52198 227 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 C20orf204Q6ZNR8 217 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 OR5P3Q8WZ94 311 aa10.84□□□□□ -0.67
SHOX2-205ENST00000490689 FRMPD3Q5JV73 1810 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 FBLL1A6NHQ2 334 aaKnown RBP10.83□□□□□ -0.68
SHOX2-205ENST00000490689 NEURL1O76050 574 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 UQCRFS1P47985 274 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 ZNF83P51522 516 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 BPIFB3P59826 476 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 FA2HQ7L5A8 372 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 PRSS3P2Q8NHM4 247 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 GSX1Q9H4S2 264 aaPredicted RBP10.83□□□□□ -0.68
SHOX2-205ENST00000490689 CREBBPQ92793 2442 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 J3QR06 171 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 OR5AL1P0C617 328 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 COX6A1P12074 109 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 SUB1P53999 127 aaKnown RBP eCLIP10.83□□□□□ -0.68
SHOX2-205ENST00000490689 LINC00596Q86U02 117 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 LINC01551Q86U37 167 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 FADS6Q8N9I5 356 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 TMEM178AQ8NBL3 297 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 VSTM5A8MXK1 200 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 H3BTX0 84 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 PAX9P55771 341 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 RPL24P83731 157 aaKnown RBP10.83□□□□□ -0.68
SHOX2-205ENST00000490689 ZNF726P1Q15940 193 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 ZNF324BQ6AW86 544 aaPredicted RBP10.83□□□□□ -0.68
SHOX2-205ENST00000490689 CT55Q8WUE5 264 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 PRR14LQ5THK1 2151 aa10.83□□□□□ -0.68
SHOX2-205ENST00000490689 SNAI2O43623 268 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 REG1BP48304 166 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 STPG3Q8N7X2 389 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 OR2M7Q8NG81 312 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 FLYWCH2Q96CP2 140 aaKnown RBP10.82□□□□□ -0.68
SHOX2-205ENST00000490689 FER1L6-AS2Q96M78 137 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 CHRNA10Q9GZZ6 450 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 MS4A5Q9H3V2 200 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 CYC1P08574 325 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 GPR6P46095 362 aaPredicted RBP10.82□□□□□ -0.68
SHOX2-205ENST00000490689 RSPO1Q2MKA7 263 aaPredicted RBP10.82□□□□□ -0.68
SHOX2-205ENST00000490689 TMEM251Q8N6I4 163 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 ZNF355PQ9NSJ1 428 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 POLR3KQ9Y2Y1 108 aaPredicted RBP10.82□□□□□ -0.68
SHOX2-205ENST00000490689 TIMM9Q9Y5J7 89 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 BRCA2P51587 3418 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 IGKV1-6A0A0C4DH72 117 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 CA1P00915 261 aaPredicted RBP10.82□□□□□ -0.68
SHOX2-205ENST00000490689 MT-ND6P03923 174 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 PTGDSP41222 190 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 TDGF1P3P51864 188 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 RPL39P5Q59GN2 51 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 SAXO1Q8IYX7 474 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 OR8B2Q96RD0 313 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 C1QTNF5Q9BXJ0 243 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 WDR54Q9H977 334 aa10.82□□□□□ -0.68
SHOX2-205ENST00000490689 PRSS8Q16651 343 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 OR1B1Q8NGR6 318 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 SPSB4Q96A44 273 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 PCED1AQ9H1Q7 454 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 TMEM140Q9NV12 185 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 TCF19Q9Y242 345 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 FBXW9Q5XUX1 488 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 OR1L4Q8NGR5 311 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 CHRDL1Q9BU40 450 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 CXXC4Q9H2H0 198 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 C5orf42Q9H799 3197 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 MPDU1O75352 247 aa10.81□□□□□ -0.68
SHOX2-205ENST00000490689 DIRC2Q96SL1 478 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms