RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 RFPL4AL1F8VTS6 287 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 H0YJW9 148 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 SOCS1O15524 211 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR7C2O60412 319 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 SMIM24O75264 130 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 GADD45GO95257 159 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 LTAP01374 205 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGKV1-39P01597 117 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGLV3-27P01718 113 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 OPN1SWP03999 348 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGKV1D-39P04432 117 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 GYPCP04921 128 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 COX4I1P13073 169 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 IL1RNP18510 177 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 PPIBP23284 216 aaKnown RBP2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 CXCL12P48061 93 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 PSMD8P48556 350 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF140P52738 457 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 LINC00313P59037 77 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 SCGB2B2Q4G0G5 96 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 PRR9Q5T870 116 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 RPL13AP3Q6NVV1 102 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 C1orf174Q8IYL3 243 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 UMODL1-AS1Q8N2C9 162 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR9Q1Q8NGQ5 310 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 GPR119Q8TDV5 335 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 DNAJC9Q8WXX5 260 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 ACOT12Q8WYK0 555 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 GNPNAT1Q96EK6 184 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 CAPZA3Q96KX2 299 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 GPR82Q96P67 336 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 CCL13Q99616 98 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 CHST6Q9GZX3 395 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 GPR84Q9NQS5 396 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF492Q9P255 531 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 MARCOQ9UEW3 520 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 SLC23A2Q9UGH3 650 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 COQ4Q9Y3A0 265 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 ASB4Q9Y574 426 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 ERCC6Q03468 1493 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 SOGA1O94964 1423 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGHV3-49A0A0A0MS15 119 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGKV1-6A0A0C4DH72 117 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 SIGLEC16A6NMB1 481 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 RIIAD1A6NNX1 92 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 DEGS1O15121 323 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 SULT1C4O75897 302 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF682O95780 498 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 IFNA7P01567 189 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 APOC1P02654 83 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 BPGMP07738 259 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 RBP1P09455 135 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 TFPTP0C1Z6 253 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 SMIM17P0DL12 118 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 CNTFRP26992 372 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 S100A7P31151 101 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 PPP1CCP36873 323 aaKnown RBP2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 DEFA3P59666 94 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 CKS1BP61024 79 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 DEFA6Q01524 100 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 BAMBIQ13145 260 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 CST6Q15828 149 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 RNASE13Q5GAN3 156 aaKnown RBP2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 GLT8D1Q68CQ7 371 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZFAND6Q6FIF0 208 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 MORN3Q6PF18 240 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 TCF24Q7RTU0 167 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 SLC22A24Q8N4F4 322 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 KRTCAP2Q8N6L1 136 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR8J3Q8NGG0 315 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 RTN4IP1Q8WWV3 396 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 CHCHD7Q9BUK0 85 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 PBOV1Q9GZY1 135 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 TAAR3PQ9P1P4 343 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 AK3Q9UIJ7 227 aa2.62□□□□□ -1.99
HMGB1P38-201ENST00000490557 RFX7Q2KHR2 1363 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 CHD2O14647 1828 aaKnown RBP2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 TUBGCP6Q96RT7 1819 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 LINC00862A6NCI5 91 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 MIF4GDA9UHW6 222 aaKnown RBP2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 COX7A2LO14548 114 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 BANF1O75531 89 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 PIAS1O75925 651 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 FSTL3O95633 263 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 OGNP20774 298 aaKnown RBP2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 SDC4P31431 198 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 G6PCP35575 357 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 TNFAIP6P98066 277 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 HOXC5Q00444 222 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 MMDQ15546 238 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 KRTAP13-2Q52LG2 175 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 Q6ZS49 121 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 ANGPTL5Q86XS5 388 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 SGPP2Q8IWX5 399 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 FER1L6-AS1Q8NA97 138 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR4D11Q8NGI4 311 aa2.61□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR4A5Q8NH83 315 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms