RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 KHDC3LQ587J8 217 aa13.21□□□□□ -0.29
SNX5-214ENST00000490175 LRRC10Q5BKY1 277 aa13.21□□□□□ -0.29
SNX5-214ENST00000490175 HEPN1Q6WQI6 88 aa13.21□□□□□ -0.29
SNX5-214ENST00000490175 ZNF383Q8NA42 475 aa13.21□□□□□ -0.29
SNX5-214ENST00000490175 ZNF714Q96N38 554 aa13.21□□□□□ -0.29
SNX5-214ENST00000490175 KAAG1Q9UBP8 84 aa13.21□□□□□ -0.29
SNX5-214ENST00000490175 C15orf62A8K5M9 175 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 CCL21O00585 134 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 MMP23AO75900 390 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 HRASP01112 189 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 MBP02144 154 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 GNG10P50151 68 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 RAB39BQ96DA2 213 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 RCC1LQ96I51 464 aaKnown RBP13.2□□□□□ -0.3
SNX5-214ENST00000490175 RHOVQ96L33 236 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 VSIRQ9H7M9 311 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 NIT2Q9NQR4 276 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 A0A087WWC5 75 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 C15orf61A6NNL5 157 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 MDKP21741 143 aaPredicted RBP13.2□□□□□ -0.3
SNX5-214ENST00000490175 ICAM4Q14773 271 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 HAGHQ16775 308 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 SPINK9Q5DT21 86 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 VKORC1L1Q8N0U8 176 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 GGACTQ9BVM4 153 aa13.2□□□□□ -0.3
SNX5-214ENST00000490175 FOXA2Q9Y261 457 aaPredicted RBP13.2□□□□□ -0.3
SNX5-214ENST00000490175 DOCK11Q5JSL3 2073 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 H3BQ15 152 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 SRP19P09132 144 aaKnown RBP13.19□□□□□ -0.3
SNX5-214ENST00000490175 FGF7P21781 194 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 VDAC2P45880 294 aaPredicted RBP13.19□□□□□ -0.3
SNX5-214ENST00000490175 PMS2P11Q13670 270 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 ZNF726P1Q15940 193 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 TMEM200BQ69YZ2 307 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 OR10G4Q8NGN3 311 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 ZCCHC14Q8WYQ9 949 aaKnown RBP13.19□□□□□ -0.3
SNX5-214ENST00000490175 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 TMPRSS5Q9H3S3 457 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
SNX5-214ENST00000490175 IGHV1-69-2A0A0G2JMI3 117 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 LOC102723971A0A1B0GUV8 181 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 FAM90A27PA6NNH2 459 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 SOX15O60248 233 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 S100PP25815 95 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 RTL8BQ17RB0 113 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 OR4A47Q6IF82 309 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 ZNF833PQ6ZTB9 187 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 C8orf31Q8N9H6 132 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 OR51M1Q9H341 326 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 HEYLQ9NQ87 328 aaPredicted RBP13.18□□□□□ -0.3
SNX5-214ENST00000490175 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 POLEQ07864 2286 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 C17orf112F2Z3M2 114 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 CISD1Q9NZ45 108 aaKnown RBP13.18□□□□□ -0.3
SNX5-214ENST00000490175 TCF19Q9Y242 345 aa13.18□□□□□ -0.3
SNX5-214ENST00000490175 TRAV3A0A0B4J244 114 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 FCN3O75636 299 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 IFNA10P01566 189 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 CT45A6P0DMU7 189 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 CT45A5P0DMU8 189 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 CT45A7P0DMV0 189 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 TAGLN2P37802 199 aaKnown RBP13.17□□□□□ -0.3
SNX5-214ENST00000490175 ELLP55199 621 aaPredicted RBP13.17□□□□□ -0.3
SNX5-214ENST00000490175 LINC01560Q8TB33 94 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 SIRT7Q9NRC8 400 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 YLPM1P49750 1951 aaKnown RBP13.17□□□□□ -0.3
SNX5-214ENST00000490175 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 MPDU1O75352 247 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 CLN5O75503 358 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 FSTL3O95633 263 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 RPS10P46783 165 aaKnown RBP13.17□□□□□ -0.3
SNX5-214ENST00000490175 HSPE1P61604 102 aaKnown RBP13.17□□□□□ -0.3
SNX5-214ENST00000490175 FAM71F2Q6NXP2 309 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 LCN15Q6UWW0 184 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 LYPD2Q6UXB3 125 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 H1FXQ92522 213 aaKnown RBP13.17□□□□□ -0.3
SNX5-214ENST00000490175 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 SLC35D1Q9NTN3 355 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 GNG13Q9P2W3 67 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 PRNDQ9UKY0 176 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 WDR83OSQ9Y284 106 aa13.17□□□□□ -0.3
SNX5-214ENST00000490175 LINC00587B1AMM8 73 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 DVL1O14640 695 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 IFNA1P01562 189 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 IL6RP08887 468 aaPredicted RBP13.16□□□□□ -0.3
SNX5-214ENST00000490175 BCL2P10415 239 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 CCL3L1P16619 93 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 CD1BP29016 333 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 RAB11AP62491 216 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 ACSM6Q6P461 480 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
SNX5-214ENST00000490175 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
SNX5-214ENST00000490175 ZNF596Q8TC21 504 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms