RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 THNSL2Q86YJ6 484 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 CMTM1Q8IZ96 169 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 OR8H3Q8N146 312 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 C11orf44Q8N8P7 122 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 ZNF383Q8NA42 475 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 ZBTB34Q8NCN2 500 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 OR10X1Q8NGY0 326 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 FAM110DQ8TAY7 271 aaPredicted RBP8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 RTN4IP1Q8WWV3 396 aaPredicted RBP8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 GALNT14Q96FL9 552 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 RBM14Q96PK6 669 aaKnown RBP8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 NABP2Q9BQ15 211 aa8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 MRPL20Q9BYC9 149 aaKnown RBP8.4□□□□□ -1.06
SCAMP4-208ENST00000489554 WNK1Q9H4A3 2382 aa8.4□□□□□ -1.07
SCAMP4-208ENST00000489554 MEGF8Q7Z7M0 2845 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 M0R1X1 148 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 MPPED1O15442 326 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 RLN2P04090 185 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 S100A11P31949 105 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 REG1BP48304 166 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 H2BFSP57053 126 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 DEFA6Q01524 100 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 LGALSLQ3ZCW2 172 aaPredicted RBP8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 LAMTOR1Q6IAA8 161 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 C11orf87Q6NUJ2 197 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 Q6ZS46 218 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 TBC1D26Q86UD7 250 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 ZNF546Q86UE3 836 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 LGI3Q8N145 548 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 INO80EQ8NBZ0 244 aaPredicted RBP8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 OR8H1Q8NGG4 311 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 C2orf50Q96LR7 162 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 TP53RKQ96S44 253 aa8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 RBM7Q9Y580 266 aaKnown RBP8.39□□□□□ -1.07
SCAMP4-208ENST00000489554 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 TET2Q6N021 2002 aaPredicted RBP8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 FXYD6-FXYD2A0A087WZ82 144 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 IGHV1-3A0A0C4DH29 117 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 DUXBA0A1W2PPF3 345 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 FAM90A9PA6NNJ1 464 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 KCNAB3O43448 404 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 IGKV1-39P01597 117 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 OPN1MWP04001 364 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 IGKV1D-39P04432 117 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 OPN1MW2P0DN77 364 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 OPN1MW3P0DN78 364 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 CD28P10747 220 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 F2RP25116 425 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 PSMB6P28072 239 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 ZNF345Q14585 488 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 TMEM187Q14656 261 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 SMCO1Q147U7 214 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 OPCMLQ14982 345 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 ZNF585BQ52M93 769 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 TEX261Q6UWH6 196 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 ZNF66Q6ZN08 573 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 ACOT7LQ6ZUV0 252 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 LRTM2Q8N967 370 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 OR11H4Q8NGC9 324 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 LHFPL5Q8TAF8 219 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 S1PR3Q99500 378 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 MFFQ9GZY8 342 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 NAA60Q9H7X0 242 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 UBQLN2Q9UHD9 624 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 MOB4Q9Y3A3 225 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 U3KQ87 197 aa8.38□□□□□ -1.07
SCAMP4-208ENST00000489554 C13orf42A0A1B0GVH6 325 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 KANTRA0A1W2PQU2 76 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 H0Y980 276 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 H0YJW9 148 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 RAMP3O60896 148 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 TSC22D2O75157 780 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 SIX6O95475 246 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 GAPDHP04406 335 aaKnown RBP8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 SNRNP70P08621 437 aaKnown RBP8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 OR5AC1P0C628 307 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 UCP1P25874 307 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 IL3RAP26951 378 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 THBS3P49746 956 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 EIF5AP63241 154 aaKnown RBP8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 HES1Q14469 280 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 NSUN5P1Q3KNT7 163 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 TMEM95Q3KNT9 176 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 ANKRD55Q3KP44 614 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 SP6Q3SY56 376 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 SLC51BQ86UW2 128 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 TGIF2LXQ8IUE1 241 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 OR4F17Q8NGA8 305 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 OR5AU1Q8NGC0 362 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 OR51H1Q8NH63 302 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 GLYATL2Q8WU03 294 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 PPP1R1CQ8WVI7 109 aa8.37□□□□□ -1.07
SCAMP4-208ENST00000489554 OR4F4Q96R69 305 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms