RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ATG5Q9H1Y0 275 aa8.97□□□□□ -0.97
SFXN3-207ENST00000489434 SLC2A9Q9NRM0 540 aa8.97□□□□□ -0.97
SFXN3-207ENST00000489434 LOC102724200A0A096LPH7 203 aaPredicted RBP8.96□□□□□ -0.98
SFXN3-207ENST00000489434 CXorf65A6NEN9 183 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 HMX3A6NHT5 357 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 KBTBD11O94819 623 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 HRASP01112 189 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 DEFA4P12838 97 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 HIST1H1BP16401 226 aaKnown RBP8.96□□□□□ -0.98
SFXN3-207ENST00000489434 CLEC19AQ6UXS0 136 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 PRSS48Q7RTY5 328 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 TMEM61Q8N0U2 210 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 VKORC1L1Q8N0U8 176 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 TCTEX1D2Q8WW35 142 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 MARC2Q969Z3 335 aa8.96□□□□□ -0.98
SFXN3-207ENST00000489434 RBMX2Q9Y388 322 aaKnown RBP8.96□□□□□ -0.98
SFXN3-207ENST00000489434 TRBV7-1A0A0A6YYK4 115 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 A8MWP6 167 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 NDUFB8O95169 186 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 HLA-DQB1P01920 261 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 RAB3BP20337 219 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 NFYAP23511 347 aaPredicted RBP8.95□□□□□ -0.98
SFXN3-207ENST00000489434 CRHBPP24387 322 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 OR10A3P58181 314 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 CDNFQ49AH0 187 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 RBPMS2Q6ZRY4 209 aaKnown RBP8.95□□□□□ -0.98
SFXN3-207ENST00000489434 UXS1Q8NBZ7 420 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 TMEM167AQ8TBQ9 72 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 CACNG8Q8WXS5 425 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 CXorf58Q96LI9 332 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 DCSTAMPQ9H295 470 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 SPATA2Q9UM82 520 aa8.95□□□□□ -0.98
SFXN3-207ENST00000489434 IGKV1D-8A0A087WSZ0 117 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 TRAV25A0A0B4J276 109 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 TMEM213A2RRL7 107 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 NUPR2A6NF83 97 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 ANKRD65E5RJM6 399 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 SCGNO76038 276 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 SCAF4O95104 1147 aaKnown RBP8.94□□□□□ -0.98
SFXN3-207ENST00000489434 LY6G6CO95867 125 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 IGHV3-23P01764 117 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 IL6RP08887 468 aaPredicted RBP8.94□□□□□ -0.98
SFXN3-207ENST00000489434 ZNF735P0CB33 412 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 PSMB6P28072 239 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 APOC4P55056 127 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 RPL30P62888 115 aaKnown RBP8.94□□□□□ -0.98
SFXN3-207ENST00000489434 RPL8P62917 257 aaKnown RBP8.94□□□□□ -0.98
SFXN3-207ENST00000489434 HACD4Q5VWC8 232 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 CNIH2Q6PI25 160 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 ZNF66Q6ZN08 573 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 ZNF367Q7RTV3 350 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 SLC38A6Q8IZM9 456 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 LINC00476Q8WZB0 136 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 CCDC140Q96MF4 163 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 MLXQ9UH92 298 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 BLOC1S6Q9UL45 172 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 DMRT1Q9Y5R6 373 aa8.94□□□□□ -0.98
SFXN3-207ENST00000489434 CYB5BO43169 146 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 CLEC3BP05452 202 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 CRYGCP07315 174 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 MYOD1P15172 320 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 AREGP15514 252 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 HLA-GP17693 338 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 EDN2P20800 178 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 GALP22466 123 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 AQP4P55087 323 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 GNG2P59768 71 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 PMS2P11Q13670 270 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 TBCEQ15813 527 aaPredicted RBP8.93□□□□□ -0.98
SFXN3-207ENST00000489434 TM4SF20Q53R12 229 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 BTNL8Q6UX41 500 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 PUSL1Q8N0Z8 303 aaKnown RBP8.93□□□□□ -0.98
SFXN3-207ENST00000489434 OR1L6Q8NGR2 347 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 OR4A5Q8NH83 315 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 FANCD2OSQ96PS1 177 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 HRASLSQ9HDD0 168 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 TAS2R8Q9NYW2 309 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 THYN1Q9P016 225 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 UFC1Q9Y3C8 167 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 SELENOKQ9Y6D0 94 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 S4R3C0 116 aa8.93□□□□□ -0.98
SFXN3-207ENST00000489434 IGKV1D-13A0A0B4J2D9 117 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 TRDV1A0A1B0GX56 115 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 ATP6V1G2O95670 118 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 IGKV1-13P0DP09 117 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 CTRB1P17538 263 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 BMI1P35226 326 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 ELLP55199 621 aaPredicted RBP8.92□□□□□ -0.98
SFXN3-207ENST00000489434 CTRB2Q6GPI1 263 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 C19orf35Q6ZS72 473 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 Q6ZWC4 215 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 SSX9Q7RTT3 188 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 MFSD4AQ8N468 514 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 OR2C3Q8N628 320 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 NDUFB11Q9NX14 153 aa8.92□□□□□ -0.98
SFXN3-207ENST00000489434 MRPL27Q9P0M9 148 aaKnown RBP8.92□□□□□ -0.98
SFXN3-207ENST00000489434 ELF5Q9UKW6 265 aaPredicted RBP8.92□□□□□ -0.98
SFXN3-207ENST00000489434 TP53TG1Q9Y2A0 90 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms