RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CCDC124Q96CT7 223 aaKnown RBP6.59□□□□□ -1.35
SSBP1-212ENST00000489378 NRBF2Q96F24 287 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 SPIN2AQ99865 258 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 SPIN2BQ9BPZ2 258 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 ZNF430Q9H8G1 570 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-212ENST00000489378 ZNF221Q9UK13 617 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
SSBP1-212ENST00000489378 CRTAPO75718 401 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-212ENST00000489378 IFNA21P01568 189 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 IFNA17P01571 189 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 CLEC3BP05452 202 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 CD2P06729 351 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 CTSDP07339 412 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-212ENST00000489378 MYOD1P15172 320 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 RPA2P15927 270 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 ETV1P50549 477 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 GTF2A1P52655 376 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-212ENST00000489378 PPP5CP53041 499 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 ELLP55199 621 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-212ENST00000489378 UBE2KP61086 200 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 CBX3Q13185 183 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 TOR2AQ5JU69 321 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 GLT8D1Q68CQ7 371 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 LAMTOR1Q6IAA8 161 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF880Q6PDB4 577 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 TEX45Q8NA69 505 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 OR8J1Q8NGP2 316 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 SETD6Q8TBK2 473 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 PTX4Q96A99 478 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 EEF1AKMT3Q96AZ1 226 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 TXN2Q99757 166 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 FAAP24Q9BTP7 215 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF257Q9Y2Q1 563 aa6.59□□□□□ -1.36
SSBP1-212ENST00000489378 MFSD2BA6NFX1 497 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 RGS13O14921 159 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 FKBP6O75344 327 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 NAPSAO96009 420 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 PSMB6P28072 239 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 VMA21Q3ZAQ7 101 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 PET117Q6UWS5 81 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 SLC25A42Q86VD7 318 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 SYS1Q8N2H4 156 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 CENPSQ8N2Z9 138 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 GPR148Q8TDV2 347 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 TMEM190Q8WZ59 177 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 C5orf30Q96GV9 206 aa6.58□□□□□ -1.36
SSBP1-212ENST00000489378 SEPSECSQ9HD40 501 aaKnown RBP6.58□□□□□ -1.36
SSBP1-212ENST00000489378 TRAV8-7A0A075B6U6 113 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 C15orf61A6NNL5 157 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 GIG44P09565 113 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-212ENST00000489378 MIFP14174 115 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 IGFBP3P17936 291 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-212ENST00000489378 ZBTB25P24278 435 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 GPR183P32249 361 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 TFPI2P48307 235 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 SNRPGP62308 76 aaKnown RBP6.57□□□□□ -1.36
SSBP1-212ENST00000489378 KDM4DQ6B0I6 523 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 AWAT2Q6E213 333 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF367Q7RTV3 350 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 C6orf201Q7Z4U5 140 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 ARHGAP24Q8N264 748 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 JAGN1Q8N5M9 183 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF436Q9C0F3 470 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-212ENST00000489378 CHMP1AQ9HD42 196 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-212ENST00000489378 ARL2BPQ9Y2Y0 163 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 X6R8D5 127 aa6.57□□□□□ -1.36
SSBP1-212ENST00000489378 IGHV3OR16-8A0A075B7F1 116 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 A0A1B0GW64 132 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 NPIPB5A8MRT5 1133 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 E7EUB6 86 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF207O43670 478 aaKnown RBP6.56□□□□□ -1.36
SSBP1-212ENST00000489378 ACTL6BO94805 426 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 TNFRSF6BO95407 300 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 CRYZL1O95825 349 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 AREGP15514 252 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 RTL8BQ17RB0 113 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 XAF1Q6GPH4 301 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 SSX9Q7RTT3 188 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 AQP12AQ8IXF9 295 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-212ENST00000489378 CCDC197Q8NCU1 140 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 LGALS12Q96DT0 336 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 RNF125Q96EQ8 232 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 CIB1Q99828 191 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 HDHD3Q9BSH5 251 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-212ENST00000489378 DAZ1Q9NQZ3 744 aaKnown RBP6.56□□□□□ -1.36
SSBP1-212ENST00000489378 SDHAF2Q9NX18 166 aa6.56□□□□□ -1.36
SSBP1-212ENST00000489378 EXOGQ9Y2C4 368 aaKnown RBP6.56□□□□□ -1.36
SSBP1-212ENST00000489378 TRBV7-1A0A0A6YYK4 115 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 IGKV1-6A0A0C4DH72 117 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 DPPA5A6NC42 116 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 ZNF705EA8MWA4 302 aaPredicted RBP6.55□□□□□ -1.36
SSBP1-212ENST00000489378 PTGES3LE9PB15 166 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 IL6RP08887 468 aaPredicted RBP6.55□□□□□ -1.36
SSBP1-212ENST00000489378 GSTT2P0CG29 244 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 GSTT2BP0CG30 244 aa6.55□□□□□ -1.36
SSBP1-212ENST00000489378 SAA1P0DJI8 122 aaPredicted RBP6.55□□□□□ -1.36
SSBP1-212ENST00000489378 GBX2P52951 348 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms