RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 REREQ9P2R6 1566 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 CCL26Q9Y258 94 aa2.04□□□□□ -2.08
XRN1-213ENST00000489241 DSCAMO60469 2012 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 CACNA1SQ13698 1873 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 A0A087WUJ7 227 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 TMEM269A0A1B0GVZ9 245 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 PQLC2LA1A4F0 135 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 PSMD12O00232 456 aaPredicted RBP2.03□□□□□ -2.08
XRN1-213ENST00000489241 GNRH2O43555 120 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 KCNE1P15382 129 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 GZMHP20718 246 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 HIST1H1TP22492 207 aaPredicted RBP2.03□□□□□ -2.08
XRN1-213ENST00000489241 CD24P25063 80 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 HSD11B1P28845 292 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 PSME3P61289 254 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 RPL30P62888 115 aaKnown RBP2.03□□□□□ -2.08
XRN1-213ENST00000489241 CAV1Q03135 178 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 C20orf196Q8IYI0 205 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 OR5B17Q8NGF7 314 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 ROPN1LQ96C74 230 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 ERMAPQ96PL5 475 aaPredicted RBP2.03□□□□□ -2.08
XRN1-213ENST00000489241 TLNRD1Q9H1K6 362 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 GLTPQ9NZD2 209 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 MRPL27Q9P0M9 148 aaKnown RBP2.03□□□□□ -2.08
XRN1-213ENST00000489241 PSORS1C2Q9UIG4 136 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 FAM215AQ9Y5M1 114 aa2.03□□□□□ -2.08
XRN1-213ENST00000489241 MTUS2Q5JR59 1369 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 DHX57Q6P158 1386 aaKnown RBP2.02□□□□□ -2.09
XRN1-213ENST00000489241 KNCNA6PVL3 124 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 TXNDC9O14530 226 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 NSA2O95478 260 aaKnown RBP2.02□□□□□ -2.09
XRN1-213ENST00000489241 HAND1O96004 215 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 FUSP35637 526 aaKnown RBP eCLIP2.02□□□□□ -2.09
XRN1-213ENST00000489241 CAPZBP47756 277 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 RAB13P51153 203 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 EDDM3AQ14507 147 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 SSX8Q7RTT4 187 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 CDC26Q8NHZ8 85 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 DGCR14Q96DF8 476 aaKnown RBP2.02□□□□□ -2.09
XRN1-213ENST00000489241 DCUN1D1Q96GG9 259 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 DCSTAMPQ9H295 470 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 NLRC5Q86WI3 1866 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 ZNF407Q9C0G0 2248 aa2.02□□□□□ -2.09
XRN1-213ENST00000489241 DICER1Q9UPY3 1922 aaKnown RBP2.01□□□□□ -2.09
XRN1-213ENST00000489241 MUC21A0A0G2JKD1 596 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 A0A0J9YY10 115 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 MUC21A0A140T8X8 626 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 A0A1B0GX78 115 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 I3L521 148 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 FAAHO00519 579 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 HLA-DRB1P01911 266 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 SRP19P09132 144 aaKnown RBP2.01□□□□□ -2.09
XRN1-213ENST00000489241 RPL5P46777 297 aaKnown RBP2.01□□□□□ -2.09
XRN1-213ENST00000489241 FXYD7P58549 80 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 SNRPD2P62316 118 aaKnown RBP2.01□□□□□ -2.09
XRN1-213ENST00000489241 POLR2GP62487 172 aaKnown RBP eCLIP2.01□□□□□ -2.09
XRN1-213ENST00000489241 BASP1P80723 227 aaKnown RBP2.01□□□□□ -2.09
XRN1-213ENST00000489241 RUNX1Q01196 453 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 MIAQ16674 131 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 AKIRIN2Q53H80 203 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 GLT8D1Q68CQ7 371 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 LPCAT3Q6P1A2 487 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 TBC1D19Q8N5T2 526 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 ZNF283Q8N7M2 679 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 CISHQ9NSE2 258 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 PAQR5Q9NXK6 330 aaPredicted RBP2.01□□□□□ -2.09
XRN1-213ENST00000489241 PRELID3BQ9Y3B1 194 aa2.01□□□□□ -2.09
XRN1-213ENST00000489241 RBM7Q9Y580 266 aaKnown RBP2.01□□□□□ -2.09
XRN1-213ENST00000489241 CCDC144AA2RUR9 1427 aa2□□□□□ -2.09
XRN1-213ENST00000489241 NUP160Q12769 1436 aa2□□□□□ -2.09
XRN1-213ENST00000489241 ADGRL3Q9HAR2 1447 aa2□□□□□ -2.09
XRN1-213ENST00000489241 ZNF638Q14966 1978 aaKnown RBP2□□□□□ -2.09
XRN1-213ENST00000489241 TRBV20OR9-2A0A075B6H5 130 aa2□□□□□ -2.09
XRN1-213ENST00000489241 FAM236DA0A1B0GTK5 79 aa2□□□□□ -2.09
XRN1-213ENST00000489241 CNIH1O95406 144 aa2□□□□□ -2.09
XRN1-213ENST00000489241 TTRP02766 147 aa2□□□□□ -2.09
XRN1-213ENST00000489241 BPGMP07738 259 aa2□□□□□ -2.09
XRN1-213ENST00000489241 FAM236CP0DP71 79 aa2□□□□□ -2.09
XRN1-213ENST00000489241 CCL5P13501 91 aa2□□□□□ -2.09
XRN1-213ENST00000489241 CBR1P16152 277 aa2□□□□□ -2.09
XRN1-213ENST00000489241 S100A7P31151 101 aa2□□□□□ -2.09
XRN1-213ENST00000489241 CA5AP35218 305 aa2□□□□□ -2.09
XRN1-213ENST00000489241 MRPS25P82663 173 aaKnown RBP2□□□□□ -2.09
XRN1-213ENST00000489241 SS18Q15532 418 aa2□□□□□ -2.09
XRN1-213ENST00000489241 GRK1Q15835 563 aa2□□□□□ -2.09
XRN1-213ENST00000489241 KCNJ8Q15842 424 aa2□□□□□ -2.09
XRN1-213ENST00000489241 TMEM97Q5BJF2 176 aa2□□□□□ -2.09
XRN1-213ENST00000489241 Q6ZS49 121 aa2□□□□□ -2.09
XRN1-213ENST00000489241 ZNF767PQ75MW2 155 aa2□□□□□ -2.09
XRN1-213ENST00000489241 OR6V1Q8N148 313 aa2□□□□□ -2.09
XRN1-213ENST00000489241 SLC35F6Q8N357 371 aa2□□□□□ -2.09
XRN1-213ENST00000489241 PAIP2Q9BPZ3 127 aaKnown RBP2□□□□□ -2.09
XRN1-213ENST00000489241 CCDC94Q9BW85 323 aaPredicted RBP2□□□□□ -2.09
XRN1-213ENST00000489241 ULBP3Q9BZM4 244 aa2□□□□□ -2.09
XRN1-213ENST00000489241 FBXO5Q9UKT4 447 aa2□□□□□ -2.09
XRN1-213ENST00000489241 SLIT2O94813 1529 aa2□□□□□ -2.09
XRN1-213ENST00000489241 TRGV5A0A0B4J1U4 118 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 OR4C46A6NHA9 309 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 UCHL1P09936 223 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 TFPTP0C1Z6 253 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms