RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 FXYD6Q9H0Q3 95 aa16.28■□□□□ 0.2
LIME1-207ENST00000489212 ADAM30Q9UKF2 790 aa16.28■□□□□ 0.2
LIME1-207ENST00000489212 A0A0G2JLM5 398 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 HMX3A6NHT5 357 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 FAM25AB3EWG3 89 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 FAM25CB3EWG5 89 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 FAM25GB3EWG6 89 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 TEX22C9J3V5 150 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 MPPED1O15442 326 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 HRASP01112 189 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 PRH1P02810 166 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 IL6RP08887 468 aaPredicted RBP16.27■□□□□ 0.2
LIME1-207ENST00000489212 ECI1P42126 302 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 ZNF45Q02386 682 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 CATR1Q13166 79 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 SPCS2Q15005 226 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 PRR25Q96S07 402 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 SPIN2AQ99865 258 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 SPIN2BQ9BPZ2 258 aa16.27■□□□□ 0.2
LIME1-207ENST00000489212 ZMAT5Q9UDW3 170 aaKnown RBP16.27■□□□□ 0.2
LIME1-207ENST00000489212 ANKRD34BA5PLL1 514 aa16.26■□□□□ 0.19
LIME1-207ENST00000489212 MYOD1P15172 320 aa16.26■□□□□ 0.19
LIME1-207ENST00000489212 AADACL3Q5VUY0 350 aa16.26■□□□□ 0.19
LIME1-207ENST00000489212 OR4A47Q6IF82 309 aa16.26■□□□□ 0.19
LIME1-207ENST00000489212 TTC9CQ8N5M4 171 aa16.26■□□□□ 0.19
LIME1-207ENST00000489212 PGLYRP1O75594 196 aaPredicted RBP16.25■□□□□ 0.19
LIME1-207ENST00000489212 HPRT1P00492 218 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 TRBV12-3P01733 135 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 RCVRNP35243 200 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 RPL27AP46776 148 aaKnown RBP16.25■□□□□ 0.19
LIME1-207ENST00000489212 INSL3P51460 131 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 RNASE12Q5GAN4 147 aaKnown RBP16.25■□□□□ 0.19
LIME1-207ENST00000489212 ZNF343Q6P1L6 599 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 ACSM6Q6P461 480 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 C19orf35Q6ZS72 473 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 CLVS1Q8IUQ0 354 aaPredicted RBP16.25■□□□□ 0.19
LIME1-207ENST00000489212 OR6F1Q8NGZ6 308 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 USMG5Q96IX5 58 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 RANGRFQ9HD47 186 aaPredicted RBP16.25■□□□□ 0.19
LIME1-207ENST00000489212 AKIP1Q9NQ31 210 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 BET1LQ9NYM9 111 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 EXTL2Q9UBQ6 330 aa16.25■□□□□ 0.19
LIME1-207ENST00000489212 TRBV9A0A0B4J1U6 114 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 TRAV3A0A0B4J244 114 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 SAP30O75446 220 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 S1PR2O95136 353 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 RLN1P04808 185 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 ZNF735P0CB33 412 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 MAS1LP35410 378 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 TAS2R31P59538 309 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 RPL8P62917 257 aaKnown RBP16.24■□□□□ 0.19
LIME1-207ENST00000489212 RHOGP84095 191 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 POU2AF1Q16633 256 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 ZNF429Q86V71 674 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 BORCS5Q969J3 196 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 FYTTD1Q96QD9 318 aaKnown RBP16.24■□□□□ 0.19
LIME1-207ENST00000489212 MIXL1Q9H2W2 232 aa16.24■□□□□ 0.19
LIME1-207ENST00000489212 CGB1A6NKQ9 187 aa16.23■□□□□ 0.19
LIME1-207ENST00000489212 NQO2P16083 231 aa16.23■□□□□ 0.19
LIME1-207ENST00000489212 OR4A5Q8NH83 315 aa16.23■□□□□ 0.19
LIME1-207ENST00000489212 ABHD1Q96SE0 405 aa16.23■□□□□ 0.19
LIME1-207ENST00000489212 PLEKHA2Q9HB19 425 aa16.23■□□□□ 0.19
LIME1-207ENST00000489212 HRASLSQ9HDD0 168 aa16.23■□□□□ 0.19
LIME1-207ENST00000489212 GPR31O00270 319 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 AREGP15514 252 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 HLA-GP17693 338 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 ZP3P21754 424 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 TSPAN5P62079 268 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 OR52I2Q8NH67 350 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 CD300LFQ8TDQ1 290 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 AIFM2Q9BRQ8 373 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 SLC2A9Q9NRM0 540 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 TMEM140Q9NV12 185 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 PEF1Q9UBV8 284 aaKnown RBP16.22■□□□□ 0.19
LIME1-207ENST00000489212 KLK11Q9UBX7 282 aa16.22■□□□□ 0.19
LIME1-207ENST00000489212 ZNF256Q9Y2P7 627 aaPredicted RBP16.22■□□□□ 0.19
LIME1-207ENST00000489212 LSM4Q9Y4Z0 139 aaKnown RBP16.22■□□□□ 0.19
LIME1-207ENST00000489212 NPIPB5A8MRT5 1133 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 M0QYG6 137 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 UPK2O00526 184 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 CTDSP2O14595 271 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 RPA2P15927 270 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 F2RP25116 425 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 KLF5Q13887 457 aaPredicted RBP16.21■□□□□ 0.19
LIME1-207ENST00000489212 COMMD9Q9P000 198 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 ZNF257Q9Y2Q1 563 aa16.21■□□□□ 0.19
LIME1-207ENST00000489212 FAM223BA6NKX1 122 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 OR2J3O76001 311 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 OR2B8PP59922 312 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 EXOSC2Q13868 293 aaKnown RBP16.2■□□□□ 0.18
LIME1-207ENST00000489212 ZNF585BQ52M93 769 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 PHLDA2Q53GA4 152 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 VAX1Q5SQQ9 334 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 SLC25A42Q86VD7 318 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 FAM223AQ8IWN6 122 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 LAX1Q8IWV1 398 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 CMTM1Q8IZ96 169 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 RAB2BQ8WUD1 216 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 FCAMRQ8WWV6 532 aa16.2■□□□□ 0.18
LIME1-207ENST00000489212 DGCR14Q96DF8 476 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms