RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 GIPP09681 153 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-208ENST00000488989 TMEM11P17152 192 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 CNTFRP26992 372 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 IER3P46695 156 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 RELBQ01201 579 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 HES1Q14469 280 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 SMCO1Q147U7 214 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 IAH1Q2TAA2 248 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-208ENST00000488989 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 FOXRED2Q8IWF2 684 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 ZBTB8BQ8NAP8 495 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-208ENST00000488989 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
CLDN11-208ENST00000488989 NMES1Q9C002 83 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 ZNF436Q9C0F3 470 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-208ENST00000488989 CACNG5Q9UF02 275 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 CDC42EP3Q9UKI2 254 aa12.79□□□□□ -0.36
CLDN11-208ENST00000488989 C5orf51A6NDU8 294 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 H3BUX3 64 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 SLC25A17O43808 307 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 KBTBD11O94819 623 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 F2RL1P55085 397 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 CYCSP99999 105 aaKnown RBP12.78□□□□□ -0.36
CLDN11-208ENST00000488989 SCGB2A2Q13296 93 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 MMDQ15546 238 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 IZUMO4Q1ZYL8 232 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 MRGPRG-AS1Q2M3A8 158 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 THOC7Q6I9Y2 204 aaKnown RBP12.78□□□□□ -0.36
CLDN11-208ENST00000488989 OR4D5Q8NGN0 318 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 OR5R1Q8NH85 324 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 RBM14Q96PK6 669 aaKnown RBP12.78□□□□□ -0.36
CLDN11-208ENST00000488989 GSX1Q9H4S2 264 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-208ENST00000488989 RANBP3Q9H6Z4 567 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-208ENST00000488989 C1RLQ9NZP8 487 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 PITPNC1Q9UKF7 332 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 SIGLEC9Q9Y336 463 aa12.78□□□□□ -0.36
CLDN11-208ENST00000488989 TRAV3A0A0B4J244 114 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 C13orf42A0A1B0GVH6 325 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 C15orf61A6NNL5 157 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 FAM25EA8MYX2 175 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 OR2F2O95006 317 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 HNF4GQ14541 408 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 C5orf64Q2M2E5 130 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 C16orf82Q7Z2V1 217 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 ZNF429Q86V71 674 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 FAM71E2Q8N5Q1 922 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 Q8N9W7 124 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 ZDHHC16Q969W1 377 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 ST6GAL2Q96JF0 529 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 NEURL2Q9BR09 285 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-208ENST00000488989 KIAA1456Q9P272 454 aa12.77□□□□□ -0.37
CLDN11-208ENST00000488989 FAM90A26D6RGX4 464 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 FGF16O43320 207 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 IGHV4-59P01825 116 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 RAP2BP61225 183 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 PDLIM3Q53GG5 364 aaPredicted RBP12.76□□□□□ -0.37
CLDN11-208ENST00000488989 PPP1R27Q86WC6 154 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 MMD2Q8IY49 270 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 TMEM86BQ8N661 226 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 SSMEM1Q8WWF3 244 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 WDR89Q96FK6 387 aaPredicted RBP12.76□□□□□ -0.37
CLDN11-208ENST00000488989 FYTTD1Q96QD9 318 aaKnown RBP12.76□□□□□ -0.37
CLDN11-208ENST00000488989 PDCD10Q9BUL8 212 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 FBXL15Q9H469 300 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 TPSG1Q9NRR2 321 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
CLDN11-208ENST00000488989 METTL1Q9UBP6 276 aaKnown RBP12.76□□□□□ -0.37
CLDN11-208ENST00000488989 FOXA2Q9Y261 457 aaPredicted RBP12.76□□□□□ -0.37
CLDN11-208ENST00000488989 CCNKO75909 580 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 SNAPC5O75971 98 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 MAS1LP35410 378 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 CD83Q01151 205 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 ID3Q02535 119 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 PRSS8Q16651 343 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 AKAP14Q86UN6 197 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 SIGLECL1Q8N7X8 197 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 OR52E5Q8NH55 327 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 OR4A16Q8NH70 328 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 SLC25A33Q9BSK2 321 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-208ENST00000488989 RANGRFQ9HD47 186 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-208ENST00000488989 FKBP11Q9NYL4 201 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 CACFD1Q9UGQ2 172 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 NSG2Q9Y328 171 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 MOB4Q9Y3A3 225 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 POMT1Q9Y6A1 747 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 MTORP42345 2549 aa12.75□□□□□ -0.37
CLDN11-208ENST00000488989 SRD5A1P18405 259 aa12.74□□□□□ -0.37
CLDN11-208ENST00000488989 RPL8P62917 257 aaKnown RBP12.74□□□□□ -0.37
CLDN11-208ENST00000488989 TCTE3Q8IZS6 198 aa12.74□□□□□ -0.37
CLDN11-208ENST00000488989 OR1S1Q8NH92 325 aa12.74□□□□□ -0.37
CLDN11-208ENST00000488989 CHIAQ9BZP6 476 aa12.74□□□□□ -0.37
CLDN11-208ENST00000488989 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
CLDN11-208ENST00000488989 HSPB7Q9UBY9 170 aa12.74□□□□□ -0.37
CLDN11-208ENST00000488989 NSD1Q96L73 2696 aaPredicted RBP12.74□□□□□ -0.37
CLDN11-208ENST00000488989 BTBD17A6NE02 478 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
CLDN11-208ENST00000488989 INAFM1C9JVW0 142 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 233.4 ms