RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 RPL27AP46776 148 aaKnown RBP9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 FXYD4P59646 89 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 SLC25A42Q86VD7 318 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 SPAG16Q8N0X2 631 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 NECAP1Q8NC96 275 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 VSTM2AQ8TAG5 236 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 TMEM167AQ8TBQ9 72 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 YIPF6Q96EC8 236 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 S100A16Q96FQ6 103 aaKnown RBP9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 RCHY1Q96PM5 261 aa9.09□□□□□ -0.95
CCHCR1-215ENST00000488920 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 DPPA5A6NC42 116 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 H0Y980 276 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 XRCC3O43542 346 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 AREGP15514 252 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 MAS1LP35410 378 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 KIR2DS2P43631 304 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 CBX5P45973 191 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 MSMO1Q15800 293 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 C15orf32Q32M92 178 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 TIMM50Q3ZCQ8 353 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 TSPAN14Q8NG11 270 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 OR5AP2Q8NGF4 316 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 GIMAP1Q8WWP7 306 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 SLC2A9Q9NRM0 540 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 FBXL7Q9UJT9 491 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 ZNF257Q9Y2Q1 563 aa9.08□□□□□ -0.96
CCHCR1-215ENST00000488920 HUWE1Q7Z6Z7 4374 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 A0A087WXM4 84 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 IZUMO1RA6ND01 250 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 NPIPB5A8MRT5 1133 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 PPP5D1E7EU14 171 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 TMEM127O75204 238 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 NDUFB8O95169 186 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 IGHV3-23P01764 117 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 HLA-AP01891 365 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 ZNF735P0CB33 412 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 HLA-GP17693 338 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 RFX2P48378 723 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 RPL8P62917 257 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 OR4A47Q6IF82 309 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 ZNF818PQ6ZRF7 136 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 TMEM17Q86X19 198 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 CROCCP3Q8IVE0 287 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 SGPP2Q8IWX5 399 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 SAMD12Q8N8I0 201 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 ZBTB34Q8NCN2 500 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 ZMAT4Q9H898 229 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 HRASLSQ9HDD0 168 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 IFT46Q9NQC8 304 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 C19orf73Q9NVV2 129 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 SIGLEC8Q9NYZ4 499 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 PEMTQ9UBM1 199 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 S4R3C0 116 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 TNCP24821 2201 aa9.07□□□□□ -0.96
CCHCR1-215ENST00000488920 TRAV3A0A0B4J244 114 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 OR2C1O95371 312 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 PMP2P02689 132 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 REG1AP05451 166 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 PSMB6P28072 239 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 MECP2P51608 486 aaKnown RBP9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 TAS2R20P59543 309 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 HERV-K104P61576 105 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 UBE2NLQ5JXB2 153 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 TMEM69Q5SWH9 247 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 ADAMTSL5Q6ZMM2 481 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 OR51H1Q8NH63 302 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 OR4A5Q8NH83 315 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 AIFM2Q9BRQ8 373 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 VCX3AQ9NNX9 186 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 EHFQ9NZC4 300 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 DMRT1Q9Y5R6 373 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 RYR3Q15413 4870 aa9.06□□□□□ -0.96
CCHCR1-215ENST00000488920 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 CGB1A6NKQ9 187 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 A8MZ25 164 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 C3orf84H3BNL1 204 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 RBFOX2O43251 390 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 GGCTO75223 188 aaKnown RBP9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 HPRT1P00492 218 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 CRYGCP07315 174 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 DEFA4P12838 97 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 RPA2P15927 270 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 EDN2P20800 178 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 GNRHRP30968 328 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 TAS2R31P59538 309 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 OR2B8PP59922 312 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 CATR1Q13166 79 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 AADACL3Q5VUY0 350 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 DHRS11Q6UWP2 260 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 GTSCR1Q86UQ5 136 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 Q8N402 240 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 KCTD12Q96CX2 325 aaKnown RBP9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 THAP7Q9BT49 309 aaPredicted RBP9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 TUBA4BQ9H853 241 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 BET1LQ9NYM9 111 aa9.05□□□□□ -0.96
CCHCR1-215ENST00000488920 UPK2O00526 184 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms