RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PARP12Q9H0J9 701 aaKnown RBP15.71■□□□□ 0.1
CCM2-216ENST00000488727 MAGT1Q9H0U3 335 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 TREM1Q9NP99 234 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 IDI2-AS1Q9NZ38 188 aa15.71■□□□□ 0.1
CCM2-216ENST00000488727 RBM7Q9Y580 266 aaKnown RBP15.71■□□□□ 0.1
CCM2-216ENST00000488727 CRLF1O75462 422 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 TMEM50AO95807 157 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 CD5P06127 495 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 OR8U9P0C7N5 309 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 COX7A1P24310 79 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 SRP14P37108 136 aaKnown RBP15.7■□□□□ 0.1
CCM2-216ENST00000488727 AKR1C2P52895 323 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 AKR1C1Q04828 323 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 TEX29Q8N6K0 151 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 OR8U1Q8NH10 309 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 TMEM133Q9H2Q1 129 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 CACFD1Q9UGQ2 172 aa15.7■□□□□ 0.1
CCM2-216ENST00000488727 IGHV1-69DA0A0B4J2H0 117 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 LOC105371267A0A1B0GV96 52 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 A0A1W2PRD5 423 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 A0A1W2PRF3 423 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 A0A1W2PRM7 423 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 DNASE2O00115 360 aaPredicted RBP15.69■□□□□ 0.1
CCM2-216ENST00000488727 F2RL2O00254 374 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 IGHV1-69P01742 117 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 NFYBP25208 207 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 PAX9P55771 341 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 LOXL3P58215 753 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 EIF4EBP1Q13541 118 aaPredicted RBP15.69■□□□□ 0.1
CCM2-216ENST00000488727 ZNF585BQ52M93 769 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 RAB40CQ96S21 281 aa15.69■□□□□ 0.1
CCM2-216ENST00000488727 SOX21Q9Y651 276 aaPredicted RBP15.69■□□□□ 0.1
CCM2-216ENST00000488727 A0A087X0M5 115 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 IGHV2-26A0A0B4J1V2 119 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 A0A1B0GX30 115 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 F8W036 122 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 TRIM77I1YAP6 450 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 SPINT2O43291 252 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 CHST1O43916 411 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 UBE2E1P51965 193 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 PIP4P2Q8N4L2 257 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 OR10A7Q8NGE5 316 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 IGHV3-43A0A0B4J1X8 118 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 IGKV1-5P01602 117 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 IGHV3-7P01780 117 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 IGHV3-43DP0DP04 118 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 RNASE11Q8TAA1 199 aaKnown RBP15.68■□□□□ 0.1
CCM2-216ENST00000488727 C22orf15Q8WYQ4 148 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 LEAP2Q969E1 77 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 SH3BGRL3Q9H299 93 aa15.68■□□□□ 0.1
CCM2-216ENST00000488727 ZFHX3Q15911 3703 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 SRD5A1P18405 259 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 EPHA1P21709 976 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 CAMLGP49069 296 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 RPL23AP62750 156 aaKnown RBP15.67■□□□□ 0.1
CCM2-216ENST00000488727 PUSL1Q8N0Z8 303 aaKnown RBP15.67■□□□□ 0.1
CCM2-216ENST00000488727 BCL6BQ8N143 479 aaPredicted RBP15.67■□□□□ 0.1
CCM2-216ENST00000488727 ABHD12Q8N2K0 398 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 HSD17B11Q8NBQ5 300 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 OR11H6Q8NGC7 330 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 OR13D1Q8NGV5 346 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 FAM216AQ8WUB2 273 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 TMEM231Q9H6L2 316 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 COA4Q9NYJ1 87 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 WSB1Q9Y6I7 421 aa15.67■□□□□ 0.1
CCM2-216ENST00000488727 NIPBLQ6KC79 2804 aaeCLIP15.67■□□□□ 0.11e-6■■■■■ 35.4
CCM2-216ENST00000488727 ODF3BA8MYP8 253 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 DYNLT3P51808 116 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 CLINT1Q14677 625 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 Q6ZRM9 215 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 TCTEX1D1Q8N7M0 179 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 OR52L2PQ8NGH6 319 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 OR5C1Q8NGR4 320 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 CLEC7AQ9BXN2 247 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 GFOD1Q9NXC2 390 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 CACNG5Q9UF02 275 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 FAM96BQ9Y3D0 163 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 CUBNO60494 3623 aa15.66■□□□□ 0.1
CCM2-216ENST00000488727 UMAD1C9J7I0 102 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 FAM90A26D6RGX4 464 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 NPFFO15130 113 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 TXNL1O43396 289 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 TSPAN15O95858 294 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 ATP6V0CP27449 155 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 SNCAP37840 140 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 HTD2P86397 168 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 GUCA2BQ16661 112 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 MIDNQ504T8 468 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 C9orf139Q6ZV77 190 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 GNPNAT1Q96EK6 184 aaPredicted RBP15.65■□□□□ 0.1
CCM2-216ENST00000488727 ATP5SQ99766 215 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 OR2D2Q9H210 308 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 RAB9BQ9NP90 201 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 ZNRD1Q9P1U0 126 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 PSG11Q9UQ72 335 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 TSPAN4O14817 238 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 SAA4P35542 130 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 ARHGDIBP52566 201 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 TAS2R30P59541 319 aa15.65■□□□□ 0.1
CCM2-216ENST00000488727 CATR1Q13166 79 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms