RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TEX22C9J3V5 150 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 CREBL2O60519 120 aaPredicted RBP12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 HPRT1P00492 218 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 CATR1Q13166 79 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 OR51H1Q8NH63 302 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 DCUN1D4Q92564 292 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 ISOC1Q96CN7 298 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 ZNF355PQ9NSJ1 428 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 BET1LQ9NYM9 111 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 CEPT1Q9Y6K0 416 aa12.3□□□□□ -0.44
CTDSP1-209ENST00000488627 LINC01619G3V211 115 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 H3BMQ9 156 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 K7EIL1 84 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 ACTL6BO94805 426 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 HSPB1P04792 205 aaKnown RBP12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 OR9G9P0C7N8 305 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 TAS2R31P59538 309 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 RNASE12Q5GAN4 147 aaKnown RBP12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 OR4A47Q6IF82 309 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 TTC9CQ8N5M4 171 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 CD300LFQ8TDQ1 290 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 DPF1Q92782 380 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 PHB2Q99623 299 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 SPIN2AQ99865 258 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 SPIN2BQ9BPZ2 258 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 SLIRPQ9GZT3 109 aaKnown RBP12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 PLEKHA2Q9HB19 425 aa12.29□□□□□ -0.44
CTDSP1-209ENST00000488627 TRBV9A0A0B4J1U6 114 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 TRAV3A0A0B4J244 114 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 WI2-2373I1.2A0A1W2PRP0 233 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 HMX3A6NHT5 357 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 CGB1A6NKQ9 187 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 SEC14L6B5MCN3 397 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 M0QYG6 137 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 GPR31O00270 319 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 RGS5O15539 181 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 S1PR2O95136 353 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 RLN1P04808 185 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 MYOD1P15172 320 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 NQO2P16083 231 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 F2RP25116 425 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 MAS1LP35410 378 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 SLURP1P55000 103 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 UCP3P55916 312 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 TSPAN5P62079 268 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 DEFA5Q01523 94 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 ZNF45Q02386 682 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 ZNF585BQ52M93 769 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 C15orf40Q8WUR7 153 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 DGCR14Q96DF8 476 aaKnown RBP12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 AIFM2Q9BRQ8 373 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
CTDSP1-209ENST00000488627 A0A0G2JLM5 398 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 UPK2O00526 184 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 PRH1P02810 166 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 CD3DP04234 171 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 RPL8P62917 257 aaKnown RBP12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 DGCR2P98153 550 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 ZNF343Q6P1L6 599 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 CMTM1Q8IZ96 169 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 MRAPQ8TCY5 172 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 FCAMRQ8WWV6 532 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 USMG5Q96IX5 58 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 SLC2A9Q9NRM0 540 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 COA4Q9NYJ1 87 aa12.27□□□□□ -0.45
CTDSP1-209ENST00000488627 C13orf42A0A1B0GVH6 325 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 GABARAPH6UMI1 98 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 OVOL1O14753 267 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 CD74P04233 296 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 HLA-GP17693 338 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 TBPP20226 339 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 LPAR6P43657 344 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 PHLDA2Q53GA4 152 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 LPCAT3Q6P1A2 487 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 OR4D10Q8NGI6 311 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 NXF2Q9GZY0 626 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 HRASLSQ9HDD0 168 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 AKIP1Q9NQ31 210 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 COMMD9Q9P000 198 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 TGP01266 2768 aa12.26□□□□□ -0.45
CTDSP1-209ENST00000488627 NPIPB5A8MRT5 1133 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 MPPED1O15442 326 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 CRYGCP07315 174 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 FGF2P09038 288 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 OR2B8PP59922 312 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 RHOGP84095 191 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 KLK9Q2XQG4 91 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 RNASE10Q5GAN6 216 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms