RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 TRIM77I1YAP6 450 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 PITX3O75364 302 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 MED6O75586 246 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 TOX4O94842 621 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 P0C879 139 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 MMP9P14780 707 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 HTR1DP28221 377 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 LINC00205P59089 165 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 ID3Q02535 119 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 POU2AF1Q16633 256 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 LGALSLQ3ZCW2 172 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 LAMTOR1Q6IAA8 161 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 FOXRED2Q8IWF2 684 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR5AN1Q8NGI8 311 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR4P4Q8NGL7 312 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 OSR1Q8TAX0 266 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 ZNF418Q8TF45 676 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 RNF126Q9BV68 326 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 DPM3Q9P2X0 92 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 RCL1Q9Y2P8 373 aaKnown RBP9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 WASHC3Q9Y3C0 194 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 ODF3BA8MYP8 253 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 OOSP1A8MZH6 123 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 H0YIZ8 118 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 H7C2Y5 167 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 CXCL2P19875 107 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 REG1BP48304 166 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 LGALS4P56470 323 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 VAMP2P63027 116 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 TMEM177Q53S58 311 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 MINOS1Q5TGZ0 78 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 TMUB2Q71RG4 321 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR8H3Q8N146 312 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 KCNRGQ8N5I3 272 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 GON7Q9BXV9 100 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 SLA2Q9H6Q3 261 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 LPAR2Q9HBW0 351 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 MMP26Q9NRE1 261 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 PLSCR3Q9NRY6 295 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR5AC2Q9NZP5 309 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 MINOS1-NBL1R4GNA1 71 aa9.73□□□□□ -0.85
HLA-DOB-209ENST00000488325 CMYA5Q8N3K9 4069 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 KANTRA0A1W2PQU2 76 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 B4DSR2 109 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 SHOXO15266 292 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 GPR137BO60478 399 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 RBMXL2O75526 392 aaKnown RBP9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 LY86O95711 162 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 GATA3P23771 443 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 S100A11P31949 105 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 P2RY1P47900 373 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 HILS1P60008 231 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 PAX8Q06710 450 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 KLRD1Q13241 179 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 OPCMLQ14982 345 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 CXorf66Q5JRM2 361 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 TPTE2P1Q5T6R2 138 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 HCP5Q6MZN7 132 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 CCDC144NLQ6NUI1 221 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR4C13Q8NGP0 309 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR4A16Q8NH70 328 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 LHX4Q969G2 390 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 FLYWCH2Q96CP2 140 aaKnown RBP9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 RHOVQ96L33 236 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 HARBI1Q96MB7 349 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 AQP10Q96PS8 301 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 ARL6Q9H0F7 186 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 ZC4H2Q9NQZ6 224 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 TMEM140Q9NV12 185 aa9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 TBL2Q9Y4P3 447 aaKnown RBP9.72□□□□□ -0.85
HLA-DOB-209ENST00000488325 TRAV20A0A0B4J274 112 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 LY6LH3BQJ8 138 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 SSSCA1O60232 199 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 MSMBP08118 114 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 UBE2E1P51965 193 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 DLX1P56177 255 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 POLR2GP62487 172 aaKnown RBP eCLIP9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 RPL23AP62750 156 aaKnown RBP9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 IZUMO4Q1ZYL8 232 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 FBLN7Q53RD9 439 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 GPR157Q5UAW9 335 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 Q6ZRM9 215 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 SSX9Q7RTT3 188 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 MOB3BQ86TA1 216 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 VSTM2AQ8TAG5 236 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 TBX15Q96SF7 602 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 SLC25A31Q9H0C2 315 aa9.71□□□□□ -0.86
HLA-DOB-209ENST00000488325 RNF222A6NCQ9 220 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 BCL2L11O43521 198 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 SYNGR2O43760 224 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 TSC22D2O75157 780 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 RPL12P30050 165 aaKnown RBP9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 LGALS7P47929 136 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 AP2S1P53680 142 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 RPS16P62249 146 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms