RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TMEM167AQ8TBQ9 72 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 SECTM1Q8WVN6 248 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 SLC25A38Q96DW6 304 aa17.19■□□□□ 0.34
PTPN4-211ENST00000488279 OR2J3O76001 311 aa17.18■□□□□ 0.34
PTPN4-211ENST00000488279 KIR2DS2P43631 304 aa17.18■□□□□ 0.34
PTPN4-211ENST00000488279 RPL27AP46776 148 aaKnown RBP17.18■□□□□ 0.34
PTPN4-211ENST00000488279 NEDD8Q15843 81 aa17.18■□□□□ 0.34
PTPN4-211ENST00000488279 CASC10Q5T4H9 136 aa17.18■□□□□ 0.34
PTPN4-211ENST00000488279 PUSL1Q8N0Z8 303 aaKnown RBP17.18■□□□□ 0.34
PTPN4-211ENST00000488279 FYTTD1Q96QD9 318 aaKnown RBP17.18■□□□□ 0.34
PTPN4-211ENST00000488279 AIFM2Q9BRQ8 373 aa17.18■□□□□ 0.34
PTPN4-211ENST00000488279 TEX22C9J3V5 150 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 IL6RP08887 468 aaPredicted RBP17.17■□□□□ 0.34
PTPN4-211ENST00000488279 PTHLHP12272 177 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 MSMO1Q15800 293 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 OR13F1Q8NGS4 319 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 KCTD12Q96CX2 325 aaKnown RBP17.17■□□□□ 0.34
PTPN4-211ENST00000488279 GPHA2Q96T91 129 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 TUBA4BQ9H853 241 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 CCL28Q9NRJ3 127 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 SLC2A9Q9NRM0 540 aa17.17■□□□□ 0.34
PTPN4-211ENST00000488279 NPIPB5A8MRT5 1133 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 TNFSF12O43508 249 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 TMEM127O75204 238 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 LYL1P12980 280 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 MECP2P51608 486 aaKnown RBP17.16■□□□□ 0.34
PTPN4-211ENST00000488279 SSX9Q7RTT3 188 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 ZBTB34Q8NCN2 500 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 OR2K2Q8NGT1 345 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 CITED4Q96RK1 184 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 THAP7Q9BT49 309 aaPredicted RBP17.16■□□□□ 0.34
PTPN4-211ENST00000488279 AUNIPQ9H7T9 357 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 FBXL7Q9UJT9 491 aa17.16■□□□□ 0.34
PTPN4-211ENST00000488279 IZUMO1RA6ND01 250 aa17.15■□□□□ 0.34
PTPN4-211ENST00000488279 E7EUB6 86 aa17.15■□□□□ 0.34
PTPN4-211ENST00000488279 DHFRP00374 187 aa17.15■□□□□ 0.34
PTPN4-211ENST00000488279 PPYP01298 95 aa17.15■□□□□ 0.34
PTPN4-211ENST00000488279 ZNF735P0CB33 412 aa17.15■□□□□ 0.34
PTPN4-211ENST00000488279 GGCTO75223 188 aaKnown RBP17.14■□□□□ 0.33
PTPN4-211ENST00000488279 CRYGCP07315 174 aa17.14■□□□□ 0.33
PTPN4-211ENST00000488279 CBX5P45973 191 aa17.14■□□□□ 0.33
PTPN4-211ENST00000488279 RPL8P62917 257 aaKnown RBP17.14■□□□□ 0.33
PTPN4-211ENST00000488279 KCTD21Q4G0X4 260 aa17.14■□□□□ 0.33
PTPN4-211ENST00000488279 SPAG16Q8N0X2 631 aa17.14■□□□□ 0.33
PTPN4-211ENST00000488279 OR4A5Q8NH83 315 aa17.14■□□□□ 0.33
PTPN4-211ENST00000488279 SLC5A7Q9GZV3 580 aa17.14■□□□□ 0.33
PTPN4-211ENST00000488279 PPP5D1E7EU14 171 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 SULT1C2O00338 296 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 FCER2P06734 321 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 PSMB6P28072 239 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 CROCCP3Q8IVE0 287 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 OR5AP2Q8NGF4 316 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 GIMAP1Q8WWP7 306 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 HRASLSQ9HDD0 168 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 PALMDQ9NP74 551 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 BET1LQ9NYM9 111 aa17.13■□□□□ 0.33
PTPN4-211ENST00000488279 A0A1B0GW64 132 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 RBFOX2O43251 390 aaKnown RBP eCLIP17.12■□□□□ 0.337e-8■□□□□ 11.2
PTPN4-211ENST00000488279 OR2C1O95371 312 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 DEFA4P12838 97 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 AREGP15514 252 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 HLA-GP17693 338 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 FXYD4P59646 89 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 CATR1Q13166 79 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 HAGHQ16775 308 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 TIMM50Q3ZCQ8 353 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 CD300EQ496F6 205 aaPredicted RBP17.12■□□□□ 0.33
PTPN4-211ENST00000488279 OR4A47Q6IF82 309 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 ADAMTSL5Q6ZMM2 481 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 C19orf35Q6ZS72 473 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 DYNLRB2Q8TF09 96 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 S100A16Q96FQ6 103 aaKnown RBP17.12■□□□□ 0.33
PTPN4-211ENST00000488279 FANCD2OSQ96PS1 177 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 SPATA25Q9BR10 227 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 DMRT1Q9Y5R6 373 aa17.12■□□□□ 0.33
PTPN4-211ENST00000488279 XRCC3O43542 346 aa17.11■□□□□ 0.33
PTPN4-211ENST00000488279 NDUFB8O95169 186 aa17.11■□□□□ 0.33
PTPN4-211ENST00000488279 HLA-AP01891 365 aaKnown RBP17.11■□□□□ 0.33
PTPN4-211ENST00000488279 HIST1H1BP16401 226 aaKnown RBP17.11■□□□□ 0.33
PTPN4-211ENST00000488279 TAS2R31P59538 309 aa17.11■□□□□ 0.33
PTPN4-211ENST00000488279 GPHB5Q86YW7 130 aa17.11■□□□□ 0.33
PTPN4-211ENST00000488279 LAX1Q8IWV1 398 aa17.11■□□□□ 0.33
PTPN4-211ENST00000488279 LGALS9O00182 355 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 HPRT1P00492 218 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 IGHV3-23P01764 117 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 FOLR2P14207 255 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 CTRB1P17538 263 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 DEFB114Q30KQ6 69 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 CTRB2Q6GPI1 263 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 CLEC19AQ6UXS0 136 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 CD300LFQ8TDQ1 290 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 EEF1AKMT3Q96AZ1 226 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 ISOC1Q96CN7 298 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 IFT46Q9NQC8 304 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 SLC2A8Q9NY64 477 aa17.1■□□□□ 0.33
PTPN4-211ENST00000488279 MEIS3P1A6NDR6 274 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 C2orf70A6NJV1 201 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 MYOD1P15172 320 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 NQO2P16083 231 aa17.09■□□□□ 0.33
PTPN4-211ENST00000488279 ARL3P36405 182 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms