RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CFHR3Q02985 330 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 FXYD3Q14802 87 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 SP6Q3SY56 376 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 TCTEX1D4Q5JR98 221 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 KHDC1LQ5JSQ8 128 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 SHISA2Q6UWI4 295 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 LCNL1Q6ZST4 164 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 TMED4Q7Z7H5 227 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 CENPVQ7Z7K6 275 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-210ENST00000488228 PUSL1Q8N0Z8 303 aaKnown RBP8.68□□□□□ -1.02
UBE4B-210ENST00000488228 DMBX1Q8NFW5 382 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 CHPT1Q8WUD6 406 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 DEDD2Q8WXF8 326 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 OR2A7Q96R45 310 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 NAA60Q9H7X0 242 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 GPR132Q9UNW8 380 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 PKD1L1Q8TDX9 2849 aa8.68□□□□□ -1.02
UBE4B-210ENST00000488228 TRAV41A0A0B4J266 112 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 TEX13DA0A0J9YY54 714 aaPredicted RBP8.67□□□□□ -1.02
UBE4B-210ENST00000488228 C3orf85A0A1B0GTC6 90 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 CRYM-AS1A6NIL9 109 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 PLA2G10O15496 165 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 KRASP01116 189 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 OR5AC1P0C628 307 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 EGR2P11161 476 aaPredicted RBP8.67□□□□□ -1.02
UBE4B-210ENST00000488228 ERVK-16P61578 105 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 C19orf54Q5BKX5 351 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF562Q6V9R5 426 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 MMD2Q8IY49 270 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 CMYA5Q8N3K9 4069 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 TCTEX1D1Q8N7M0 179 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 OR4X2Q8NGF9 303 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 VSTM2AQ8TAG5 236 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 TMEM167AQ8TBQ9 72 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 CASTOR1Q8WTX7 329 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 SRSF12Q8WXF0 261 aaKnown RBP8.67□□□□□ -1.02
UBE4B-210ENST00000488228 CITED2Q99967 270 aaPredicted RBP8.67□□□□□ -1.02
UBE4B-210ENST00000488228 BET1LQ9NYM9 111 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 ZNF580Q9UK33 172 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 TRRAPQ9Y4A5 3859 aa8.67□□□□□ -1.02
UBE4B-210ENST00000488228 A0A1W2PRX2 142 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 NAP1L6A6NFF2 107 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 LYRM1O43325 122 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 CREBL2O60519 120 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-210ENST00000488228 OPN1MWP04001 364 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 SERPINE2P07093 398 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 OPN1MW2P0DN77 364 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 OPN1MW3P0DN78 364 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 AKR1C4P17516 323 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 CRIP2P52943 208 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-210ENST00000488228 OR2B8PP59922 312 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 SLC35B1P78383 322 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 RBMS2Q15434 407 aaKnown RBP8.66□□□□□ -1.02
UBE4B-210ENST00000488228 TRIM16LQ309B1 348 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 UNQ5815/PRO19632Q6UWF5 114 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 LFNGQ8NES3 379 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 SGMS2Q8NHU3 365 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 LHFPL5Q8TAF8 219 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 C7orf50Q9BRJ6 194 aaKnown RBP8.66□□□□□ -1.02
UBE4B-210ENST00000488228 FAM212BQ9NTI7 297 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-210ENST00000488228 TBC1D24Q9ULP9 559 aa8.66□□□□□ -1.02
UBE4B-210ENST00000488228 A0A1B0GW64 132 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 A0A1W2PN81 502 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 CENPXA8MT69 81 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 ADARB2-AS1A8MUL3 147 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 UPK2O00526 184 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 SOX15O60248 233 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 UPK1BO75841 260 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 ACTL6BO94805 426 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 NDUFB6O95139 128 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 TSPAN15O95858 294 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 IGKV1-5P01602 117 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 HLA-GP17693 338 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 UCP1P25874 307 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 CHRNA7P36544 502 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 AKR1C2P52895 323 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 RPL8P62917 257 aaKnown RBP8.65□□□□□ -1.02
UBE4B-210ENST00000488228 SUPT4H1P63272 117 aaKnown RBP8.65□□□□□ -1.02
UBE4B-210ENST00000488228 IFITM3Q01628 133 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 IZUMO4Q1ZYL8 232 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 NSUN5P1Q3KNT7 163 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 ASPHD1Q5U4P2 390 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 SEC22AQ96IW7 307 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 SCGB3A2Q96PL1 93 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 PHB2Q99623 299 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 SLC25A21Q9BQT8 299 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-210ENST00000488228 TMEM222Q9H0R3 208 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 FLVCR2Q9UPI3 526 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 FOXA2Q9Y261 457 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-210ENST00000488228 NSG2Q9Y328 171 aa8.65□□□□□ -1.02
UBE4B-210ENST00000488228 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 TCRBV4S1A1TA0A5B7 111 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 HMX3A6NHT5 357 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 DBX1A6NMT0 343 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 E7EUB6 86 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 IGHG4P01861 327 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 RPLP1P05386 114 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms