RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 E7EQL1 145 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 H0Y980 276 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 SLC25A6P12236 298 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 GNG3P63215 75 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 KCNIP4Q6PIL6 250 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 OR2Z1Q8NG97 314 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 SDSLQ96GA7 329 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 RTL8AQ9BWD3 113 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 ST3GAL6Q9Y274 331 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 ROS1P08922 2347 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 HCFC1P51610 2035 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 IGLV3-9A0A075B6K5 115 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 A0A0G2JRQ6 117 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 SYNGR1O43759 233 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 NUPR1O60356 82 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 GYPAP02724 150 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 IL3RAP26951 378 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 RANP62826 216 aaKnown RBP11.4□□□□□ -0.58
COPS7B-221ENST00000488111 ARL16Q0P5N6 197 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 MRPL30Q8TCC3 161 aaKnown RBP11.4□□□□□ -0.58
COPS7B-221ENST00000488111 LHX4Q969G2 390 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 GPHA2Q96T91 129 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 PLK3Q9H4B4 646 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 PXMP4Q9Y6I8 212 aa11.4□□□□□ -0.58
COPS7B-221ENST00000488111 OR5B21A6NL26 309 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 TNFSF12O43508 249 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 SPRY3O43610 288 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 RHBDL1O75783 438 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 GNG10P50151 68 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 SELENOVP59797 346 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 TPTE2P1Q5T6R2 138 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 HAPLN4Q86UW8 402 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 GPR146Q96CH1 333 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 ZNF488Q96MN9 340 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 TMEM106BQ9NUM4 274 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 IGKV1D-13A0A0B4J2D9 117 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 CDIPTO14735 213 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 TUSC2O75896 110 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 VENTXO95231 258 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 IGKV1-13P0DP09 117 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 DAZAP2Q15038 168 aaPredicted RBP11.39□□□□□ -0.59
COPS7B-221ENST00000488111 SRSF7Q16629 238 aaKnown RBP eCLIP11.39□□□□□ -0.59
COPS7B-221ENST00000488111 SPRNQ5BIV9 151 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 PRAMEF6Q5VXH4 476 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 TMEM144Q7Z5S9 345 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 ZCCHC24Q8N2G6 241 aaKnown RBP11.39□□□□□ -0.59
COPS7B-221ENST00000488111 WDR61Q9GZS3 305 aaKnown RBP11.39□□□□□ -0.59
COPS7B-221ENST00000488111 RIMS4Q9H426 269 aaPredicted RBP11.39□□□□□ -0.59
COPS7B-221ENST00000488111 ZNF442Q9H7R0 627 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 SLC39A9Q9NUM3 307 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 ZFP30Q9Y2G7 519 aa11.39□□□□□ -0.59
COPS7B-221ENST00000488111 ANKHD1Q8IWZ3 2542 aaKnown RBP11.38□□□□□ -0.59
COPS7B-221ENST00000488111 PLCE1Q9P212 2302 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 A0A1B0GUS0 222 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 BCL3P20749 454 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 LOXP28300 417 aaPredicted RBP11.38□□□□□ -0.59
COPS7B-221ENST00000488111 PSMB3P49720 205 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 RBM11P57052 281 aaKnown RBP11.38□□□□□ -0.59
COPS7B-221ENST00000488111 HOXA4Q00056 320 aaPredicted RBP11.38□□□□□ -0.59
COPS7B-221ENST00000488111 TOMM20LQ6UXN7 152 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 NEK7Q8TDX7 302 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 BTF3L4Q96K17 158 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 AURKAIP1Q9NWT8 199 aaPredicted RBP11.38□□□□□ -0.59
COPS7B-221ENST00000488111 MTCH1Q9NZJ7 389 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 TRAPPC1Q9Y5R8 145 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 CHD6Q8TD26 2715 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 IGKV1D-33P01593 117 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 IGKV1-33P01594 117 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 SRSF1Q07955 248 aaKnown RBP eCLIP11.38□□□□□ -0.59
COPS7B-221ENST00000488111 OR5I1Q13606 314 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 PDCD1Q15116 288 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 COL5A1-AS1Q5SY13 56 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 ZNF826PQ6ZT77 177 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 RPP25LQ8N5L8 163 aaKnown RBP11.38□□□□□ -0.59
COPS7B-221ENST00000488111 SCCPDHQ8NBX0 429 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 CXXC4Q9H2H0 198 aa11.38□□□□□ -0.59
COPS7B-221ENST00000488111 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.37□□□□□ -0.59
COPS7B-221ENST00000488111 TMEM183BQ1AE95 376 aa11.37□□□□□ -0.59
COPS7B-221ENST00000488111 TDRG1Q3Y452 100 aa11.37□□□□□ -0.59
COPS7B-221ENST00000488111 Q6ZWC4 215 aa11.37□□□□□ -0.59
COPS7B-221ENST00000488111 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
COPS7B-221ENST00000488111 CCL28Q9NRJ3 127 aa11.37□□□□□ -0.59
COPS7B-221ENST00000488111 TIMM9Q9Y5J7 89 aa11.37□□□□□ -0.59
COPS7B-221ENST00000488111 FLNCQ14315 2725 aa11.37□□□□□ -0.59
COPS7B-221ENST00000488111 FAM78BQ5VT40 261 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 CMTM2Q8TAZ6 248 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 LRP5LA4QPB2 252 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 TCF21O43680 179 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 PGLYRP1O75594 196 aaPredicted RBP11.36□□□□□ -0.59
COPS7B-221ENST00000488111 CD99P14209 185 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 PAFAH1B2P68402 229 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 HBG1P69891 147 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 HBG2P69892 147 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 TAF15Q92804 592 aaKnown RBP eCLIP11.36□□□□□ -0.59
COPS7B-221ENST00000488111 DNAJC4Q9NNZ3 241 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 PSENENQ9NZ42 101 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 IL36RNQ9UBH0 155 aa11.36□□□□□ -0.59
COPS7B-221ENST00000488111 PIGBOS1A0A0B4J2F0 54 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 A0A0U1RQK1 487 aa11.35□□□□□ -0.59
COPS7B-221ENST00000488111 ZNF320A2RRD8 509 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms