RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 MLNRO43193 412 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 LYZP61626 148 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 HABP2Q14520 560 aaPredicted RBP9.88□□□□□ -0.83
TRA2B-214ENST00000487615 SIGLECL1Q8N7X8 197 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 PARLQ9H300 379 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 TMEM106BQ9NUM4 274 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 ZNF586Q9NXT0 402 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 THYN1Q9P016 225 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 SPTAN1Q13813 2472 aaKnown RBP9.88□□□□□ -0.83
TRA2B-214ENST00000487615 MBD3L4A6NDZ8 208 aaPredicted RBP9.88□□□□□ -0.83
TRA2B-214ENST00000487615 MBD3L3A6NE82 208 aaPredicted RBP9.88□□□□□ -0.83
TRA2B-214ENST00000487615 MBD3L5A6NJ08 208 aaPredicted RBP9.88□□□□□ -0.83
TRA2B-214ENST00000487615 FOXI3A8MTJ6 420 aaPredicted RBP9.88□□□□□ -0.83
TRA2B-214ENST00000487615 CHEK1O14757 476 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 TRGC2P03986 189 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 NTF3P20783 257 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 ANOS1P23352 680 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 GLRX5Q86SX6 157 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 STXBP6Q8NFX7 210 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 OR4F17Q8NGA8 305 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 MBD3L2Q8NHZ7 208 aaPredicted RBP9.88□□□□□ -0.83
TRA2B-214ENST00000487615 PRO3102Q9H379 93 aa9.88□□□□□ -0.83
TRA2B-214ENST00000487615 IGKV1-6A0A0C4DH72 117 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 IGHV1-69-2A0A0G2JMI3 117 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 NPIPB11E5RHQ5 1161 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 GATCO43716 136 aaKnown RBP9.87□□□□□ -0.83
TRA2B-214ENST00000487615 APELAP0DMC3 54 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 TFF3Q07654 80 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 MMDQ15546 238 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 BATFQ16520 125 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 PQLC2Q6ZP29 291 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 MMD2Q8IY49 270 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 OR2T6Q8NHC8 308 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 GGACTQ9BVM4 153 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 HSPB7Q9UBY9 170 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 FUT9Q9Y231 359 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 LRP4O75096 1905 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 DLL1O00548 723 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 SLC25A17O43808 307 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 IGKV1-5P01602 117 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 ERVFRD-1P60508 538 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 SUMO1P63165 101 aaKnown RBP9.87□□□□□ -0.83
TRA2B-214ENST00000487615 OR4A47Q6IF82 309 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 B9A039 149 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 FAM157AC9JC47 383 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 DUTP33316 252 aaKnown RBP9.87□□□□□ -0.83
TRA2B-214ENST00000487615 ATP5IP56385 69 aaPredicted RBP9.87□□□□□ -0.83
TRA2B-214ENST00000487615 SELENOTP62341 195 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 Q56UQ5 140 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 ZNF439Q8NDP4 499 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 SGMS2Q8NHU3 365 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 PERPQ96FX8 193 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 ASCL3Q9NQ33 180 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 PITPNC1Q9UKF7 332 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 RNF24Q9Y225 148 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 CEP192Q8TEP8 1941 aa9.87□□□□□ -0.83
TRA2B-214ENST00000487615 C20orf202A1L168 122 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 RBFOX2O43251 390 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRA2B-214ENST00000487615 TOX4O94842 621 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 LINC00869P0C866 280 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 Q6ZSR3 168 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 PARD6AQ9NPB6 346 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 MDKP21741 143 aaPredicted RBP9.86□□□□□ -0.83
TRA2B-214ENST00000487615 FAM3BP58499 235 aaPredicted RBP9.86□□□□□ -0.83
TRA2B-214ENST00000487615 TPPP2P59282 170 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 RTP5Q14D33 572 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 DOLPP1Q86YN1 238 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 OSR1Q8TAX0 266 aaPredicted RBP9.86□□□□□ -0.83
TRA2B-214ENST00000487615 LINC00312Q9Y6C7 94 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 GTF3C1Q12789 2109 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 TGIF2-C20orf24A0A0A6YYL0 155 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 CA2P00918 260 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 FAM87AP0C7U9 286 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 APOBEC3AP31941 199 aaPredicted RBP9.86□□□□□ -0.83
TRA2B-214ENST00000487615 CCL20P78556 96 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 PAX5Q02548 391 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 MEF2CQ06413 473 aaPredicted RBP9.86□□□□□ -0.83
TRA2B-214ENST00000487615 PMS2P11Q13670 270 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 Q6ZS92 163 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 TMEM171Q8WVE6 324 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 SCNM1Q9BWG6 230 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 AAMDCQ9H7C9 122 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 MUC15Q8N387 334 aa9.86□□□□□ -0.83
TRA2B-214ENST00000487615 KIAA1324LA8MWY0 1029 aaPredicted RBP9.85□□□□□ -0.83
TRA2B-214ENST00000487615 CD55P08174 381 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 ICAM4Q14773 271 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 WDR73Q6P4I2 378 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 STPG3Q8N7X2 389 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 RASL11BQ9BPW5 248 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 TUBA4BQ9H853 241 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 MBNL3Q9NUK0 354 aaKnown RBP9.85□□□□□ -0.83
TRA2B-214ENST00000487615 CRIM1Q9NZV1 1036 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
TRA2B-214ENST00000487615 SSTP61278 116 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 RPL30P62888 115 aaKnown RBP9.85□□□□□ -0.83
TRA2B-214ENST00000487615 COQ2Q96H96 371 aa9.85□□□□□ -0.83
TRA2B-214ENST00000487615 FAM103A1Q9BTL3 118 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms