RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, human

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTFDC1-209	ENST00000487211	SERPINE3	A8MV23	424 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	VGLL3	A8MV65	326 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TRDC	B7Z8K6	153 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211		H3BUX3	64 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	CLDN34	H7C241	214 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	YPEL1	O60688	119 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	HLA-DQB1	P01920	261 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	CD24	P25063	80 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	CHRNA7	P36544	502 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ARFRP1	Q13795	201 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	HERPUD1	Q15011	391 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	UBE2NL	Q5JXB2	153 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TPTE2P1	Q5T6R2	138 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	SLC25A48	Q6ZT89	311 aa	Known RBP	4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MMD2	Q8IY49	270 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	LINC00311	Q8N616	119 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	GVQW1	Q8N7I0	195 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	C8orf31	Q8N9H6	132 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	IL1F10	Q8WWZ1	152 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ACOT12	Q8WYK0	555 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ST6GALNAC6	Q969X2	333 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	YPEL2	Q96QA6	119 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	BCL7B	Q9BQE9	202 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	AGMAT	Q9BSE5	352 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	SLIRP	Q9GZT3	109 aa	Known RBP	4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MIXL1	Q9H2W2	232 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	AUNIP	Q9H7T9	357 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	C12orf4	Q9NQ89	552 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	DIABLO	Q9NR28	239 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	OR1A1	Q9P1Q5	309 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	GNG12	Q9UBI6	72 aa		4.89	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TRBV6-7	A0A0A0MS04	114 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211		A0A0A6YYH2	397 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211		A6NJ64	397 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	LEUTX	A8MZ59	168 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	BMPR1B	O00238	502 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	FABP7	O15540	132 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	CIDEA	O60543	219 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	SCGN	O76038	276 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TSHB	P01222	138 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	APOA1	P02647	267 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	FCER2	P06734	321 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	DTYMK	P23919	212 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TALDO1	P37837	337 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	CEACAM6	P40199	344 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	REG1B	P48304	166 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TAS2R20	P59543	309 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	HLA-DRB3	P79483	266 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MADCAM1	Q13477	382 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ARL6IP1	Q15041	203 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	LY6E	Q16553	131 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	AANAT	Q16613	207 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	LRRC75B	Q2VPJ9	315 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211		Q3ZCU0	254 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	LY6G6F	Q5SQ64	297 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211		Q6ZS49	121 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	SMIM29	Q86T20	159 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TMEM86B	Q8N661	226 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	STPG4	Q8N801	248 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MAPKAPK5-AS1	Q8N8E1	139 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ZNF383	Q8NA42	475 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	OR10X1	Q8NGY0	326 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	OCC1	Q8TAD7	63 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TOLLIP	Q9H0E2	274 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	JPT1	Q9UK76	154 aa		4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MRPS7	Q9Y2R9	242 aa	Known RBP	4.88	□□□□□ -1.63
RTFDC1-209	ENST00000487211	IGLV9-49	A0A0B4J1Y8	123 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TMEM89	A2RUT3	159 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MEIS3P1	A6NDR6	274 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211		A6NDX4	124 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	CCDC160	A6NGH7	325 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ZNF736	B4DX44	427 aa	Predicted RBP	4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	BET1	O15155	118 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	GAPDH	P04406	335 aa	Known RBP	4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ZBTB25	P24278	435 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	SOX6	P35712	828 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	OR3A3	P47888	321 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	DYNLT3	P51808	116 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	GNG2	P59768	71 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MRPS15	P82914	257 aa	Known RBP	4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	PITPNA	Q00169	270 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TMEM30B	Q3MIR4	351 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	LBH	Q53QV2	105 aa	Predicted RBP	4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TMEM69	Q5SWH9	247 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	MOB1B	Q7L9L4	216 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	HOGA1	Q86XE5	327 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	LYG1	Q8N1E2	194 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	DRAM1	Q8N682	238 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	OR4A4P	Q8NGN8	299 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	FCAMR	Q8WWV6	532 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	TMEM158	Q8WZ71	300 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	AP3S1	Q92572	193 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	RPE	Q96AT9	228 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	CREB3L1	Q96BA8	519 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	DGCR14	Q96DF8	476 aa	Known RBP	4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ABHD14B	Q96IU4	210 aa		4.87	□□□□□ -1.63
RTFDC1-209	ENST00000487211	ZNF251	Q9BRH9	671 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms