RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 FCGR2BP31994 310 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-210ENST00000487017 ATP5IP56385 69 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-210ENST00000487017 SS18L1O75177 396 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-210ENST00000487017 SLC25A34Q6PIV7 304 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 ATRAIDQ6UW56 229 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 METTL26Q96S19 204 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 PARD6GQ9BYG4 376 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-210ENST00000487017 KNTC1P50748 2209 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 LYPD3O95274 346 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 RFPL3SP0C7P2 107 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 FTH1P19P0C7X4 201 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 PSG9Q00887 426 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 BIVMQ86UB2 503 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 TMEM186Q96B77 213 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 SOD3P08294 240 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 OTX1P32242 354 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-210ENST00000487017 RPS20P60866 119 aaKnown RBP13.97□□□□□ -0.17
COL7A1-210ENST00000487017 CENPWQ5EE01 88 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 REC114Q7Z4M0 266 aa13.97□□□□□ -0.17
COL7A1-210ENST00000487017 TRAV30A0A087WSZ9 112 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 EGR1P18146 543 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 OR9G1Q8NH87 305 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 IL6RP08887 468 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-210ENST00000487017 MFAP4P55083 255 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 HERPUD1Q15011 391 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 SRSF12Q8WXF0 261 aaKnown RBP13.96□□□□□ -0.17
COL7A1-210ENST00000487017 SPTBP11277 2137 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 TPRP12270 2363 aaKnown RBP13.96□□□□□ -0.17
COL7A1-210ENST00000487017 GATAD1Q8WUU5 269 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 TIMP4Q99727 224 aa13.96□□□□□ -0.17
COL7A1-210ENST00000487017 IGKV3OR2-268A0A0C4DH90 116 aa13.96□□□□□ -0.18
COL7A1-210ENST00000487017 LCN2P80188 198 aa13.96□□□□□ -0.18
COL7A1-210ENST00000487017 DPH3Q96FX2 82 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 MAP1LC3AQ9H492 121 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 A0A087WWC5 75 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 REG1AP05451 166 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 DNLZQ5SXM8 178 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 FAM53AQ6NSI3 398 aaPredicted RBP13.95□□□□□ -0.18
COL7A1-210ENST00000487017 PCSK4Q6UW60 755 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 C1QTNF5Q9BXJ0 243 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 MYOFQ9NZM1 2061 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 TMEM238LA0A1B0GVL6 79 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 FAM181BA6NEQ2 426 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 A6NJY4 79 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 C12orf77C9JDV5 145 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 FABP2P12104 132 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 NRN1LQ496H8 165 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 STPG1Q5TH74 334 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 CYP2G1PQ6ZSU1 146 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 FADS6Q8N9I5 356 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 RRHO14718 337 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 WNT9BO14905 357 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 HLA-DRB1P01911 266 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 CBLN1P23435 193 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 RPL39P5Q59GN2 51 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 RNF126Q9BV68 326 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 ZNF703Q9H7S9 590 aaPredicted RBP13.95□□□□□ -0.18
COL7A1-210ENST00000487017 ATXN7O15265 892 aaPredicted RBP13.95□□□□□ -0.18
COL7A1-210ENST00000487017 C2orf83Q53S99 150 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 LY6G6FQ5SQ64 297 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 ACP7Q6ZNF0 438 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 NPIPB3Q92617 1050 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 SLC25A28Q96A46 364 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 NEU1Q99519 415 aa13.95□□□□□ -0.18
COL7A1-210ENST00000487017 OTOFQ9HC10 1997 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 ZNF600Q6ZNG1 722 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 Q6ZT83 130 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 CLDND2Q8NHS1 167 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 A0A0G2JMZ2 1700 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 LRRC37A2A6NM11 1700 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 HAX1O00165 279 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 OR10AG1Q8NH19 301 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
COL7A1-210ENST00000487017 CA7P43166 264 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 CLEC2AQ6UVW9 174 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 FBLN5Q9UBX5 448 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 LNP1A1A4G5 178 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 H3BTX0 84 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 NUDT3O95989 172 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 SYT8Q8NBV8 401 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 GP6Q9HCN6 339 aa13.94□□□□□ -0.18
COL7A1-210ENST00000487017 TFF3Q07654 80 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 UNQ5815/PRO19632Q6UWF5 114 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 SSBP3Q9BWW4 388 aaPredicted RBP13.93□□□□□ -0.18
COL7A1-210ENST00000487017 SGK494Q96LW2 274 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 TMEM56-RWDD3S4R434 201 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 NYNRINQ9P2P1 1898 aaKnown RBP13.93□□□□□ -0.18
COL7A1-210ENST00000487017 PPIAL4CA0A0B4J2A2 164 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 A0A1W2PS18 150 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 PRSS2P07478 247 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 PPIAL4GP0DN37 164 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 ANOS1P23352 680 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 DDB2Q92466 427 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 FGF11Q92914 225 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 KLK15Q9H2R5 256 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 PROB1E7EW31 1015 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 ATP1A1-AS1Q5TC04 95 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 WDYHV1Q96HA8 205 aa13.93□□□□□ -0.18
COL7A1-210ENST00000487017 C18orf12Q96KH6 178 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms