RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 HOXA4Q00056 320 aaPredicted RBP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 MEF2CQ06413 473 aaPredicted RBP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 HABP2Q14520 560 aaPredicted RBP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 PRAMEF5Q5TYX0 476 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 FAM90A2PQ658T7 463 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 IGFL4Q6B9Z1 124 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 OR8G2PQ6IF36 304 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 FAM53AQ6NSI3 398 aaPredicted RBP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 DOLPP1Q86YN1 238 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 LINC00518Q8N0U6 118 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 RPP25LQ8N5L8 163 aaKnown RBP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 ZNRF1Q8ND25 227 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 ZNF439Q8NDP4 499 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 RFESDQ8TAC1 157 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 CA5BP1Q8WTZ4 195 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 RAB1CQ92928 201 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 RAB39BQ96DA2 213 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 GAFA1Q96PS6 74 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 S1PR3Q99500 378 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 NPCDR1Q9BY65 106 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 ESRP2Q9H6T0 727 aaKnown RBP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 GNG13Q9P2W3 67 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 FOXA2Q9Y261 457 aaPredicted RBP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 WDR83OSQ9Y284 106 aa5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 PUS1Q9Y606 427 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMARCAL1-212ENST00000486983 PRRC2CQ9Y520 2896 aaKnown RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 IGHV3OR15-7A0A075B7D8 119 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 A0A0G2JNJ9 132 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 A0A1W2PPH5 198 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 hADV38S2A0JD32 116 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 NKX6-3A6NJ46 265 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 C15orf61A6NNL5 157 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 DEFB108AA8MXU0 73 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 PRSS46E5RG02 174 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 K7EM74 188 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 TGOLN2O43493 480 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 RBMXL2O75526 392 aaKnown RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 OR2C1O95371 312 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 THBDP07204 575 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 OR9G9P0C7N8 305 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 FGF7P21781 194 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 BMP5P22003 454 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 VDAC2P45880 294 aaPredicted RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 ATP5IP56385 69 aaPredicted RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 OR2B8PP59922 312 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 DLK1P80370 383 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 MEF2BQ02080 365 aaPredicted RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 FAM27E3Q08E93 113 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 FAM71F2Q6NXP2 309 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 ACSM6Q6P461 480 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 HEPN1Q6WQI6 88 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 SSX7Q7RTT5 188 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 TCF23Q7RTU1 214 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 ZNF709Q8N972 641 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 C8orf31Q8N9H6 132 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 Q8NA96 180 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 OR4A16Q8NH70 328 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 LHX4Q969G2 390 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 DCTN5Q9BTE1 182 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 QTRT1Q9BXR0 403 aaKnown RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 ACTR3CQ9C0K3 210 aaPredicted RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 CTDSP1Q9GZU7 261 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 GAL3ST2Q9H3Q3 398 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 SAV1Q9H4B6 383 aaPredicted RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 VSIRQ9H7M9 311 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 TMEM14BQ9NUH8 114 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 SLC39A9Q9NUM3 307 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 TMEM140Q9NV12 185 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 IDI2-AS1Q9NZ38 188 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 Q9UFV3 132 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 RPUSD1Q9UJJ7 312 aaKnown RBP5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 ZNF257Q9Y2Q1 563 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 LINC00312Q9Y6C7 94 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 ACACBO00763 2458 aa5.79□□□□□ -1.48
SMARCAL1-212ENST00000486983 CFAP47Q6ZTR5 3102 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 SAA2-SAA4A0A096LPE2 208 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 TRAV38-1A0A0B4J264 116 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 A0A1W2PPE2 198 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 SMCO3A2RU48 225 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 C5orf52A6NGY3 159 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 ZFP92A6NM28 416 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 C17orf100A8MU93 164 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 VSTM5A8MXK1 200 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 K7ENP7 123 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 UBE2CO00762 179 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 CYB5BO43169 146 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 CYB5R3P00387 301 aaPredicted RBP5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 HRASP01112 189 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 IFNA17P01571 189 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 IGKV1D-33P01593 117 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 IGKV1-33P01594 117 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 S100A8P05109 93 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 IL6RP08887 468 aaPredicted RBP5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 SAA2P0DJI9 122 aaPredicted RBP5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 DAOP14920 347 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 CD1BP29016 333 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 OPRK1P41145 380 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 AKR1C3P42330 323 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 PSMB3P49720 205 aa5.78□□□□□ -1.48
SMARCAL1-212ENST00000486983 RND2P52198 227 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms